RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 DAG1Q14118 895 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 NHSL2Q5HYW2 709 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 EXOSC6Q5RKV6 272 aaKnown RBP16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 MED25Q71SY5 747 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 CDRT4Q8N9R6 151 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 OR52R1Q8NGF1 315 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 RNF31Q96EP0 1072 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 SLC38A1Q9H2H9 487 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 PIGUQ9H490 435 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 RHBDL2Q9NX52 303 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 CALML5Q9NZT1 146 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 COL5A1P20908 1838 aaPredicted RBP16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 hCG_2014768A0A024R1R8 64 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 A8MVJ9 347 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 S1PR1P21453 382 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 CHRNEQ04844 493 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 DUSP8Q13202 625 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 PUM1Q14671 1186 aaKnown RBP eCLIP16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 ARHGAP40Q5TG30 622 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 ZCCHC12Q6PEW1 402 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 HIPK1Q86Z02 1210 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 RHBDD1Q8TEB9 315 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 APOBEC4Q8WW27 367 aaKnown RBP16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 PROX1Q92786 737 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 PTCHD1Q96NR3 888 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 ZNF300Q96RE9 604 aaPredicted RBP16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 AMBRA1Q9C0C7 1298 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 SLC7A5P2Q9GIP4 190 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 SIDT1Q9NXL6 827 aaKnown RBP16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 RARRES3Q9UL19 164 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 MMACHCQ9Y4U1 282 aa16.36■□□□□ 0.21
LYSMD4-203ENST00000378904 H3BNH8 94 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 FLRT2O43155 660 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 DPM1O60762 260 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 COQ9O75208 318 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 ALPLP05186 524 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 ALOX5P09917 674 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 ITGA2P17301 1181 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 DNAJA1P31689 397 aaKnown RBP16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 PDX1P52945 283 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 SERTAD2Q14140 314 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 MFSD4BQ5TF39 518 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 MLIPQ5VWP3 458 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 RHBDD2Q6NTF9 364 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 SHQ1Q6PI26 577 aaKnown RBP16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 HMGN2P46Q86SG4 172 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 ZNF354BQ96LW1 612 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 SPATA5L1Q9BVQ7 753 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 OSBPL10Q9BXB5 764 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 REEP1Q9H902 201 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 SMPD3Q9NY59 655 aaPredicted RBP16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 SAMHD1Q9Y3Z3 626 aaKnown RBP16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 DSPPQ9NZW4 1301 aa16.35■□□□□ 0.21
LYSMD4-203ENST00000378904 HRKO00198 91 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 TIAF1O95411 115 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 IFNW1P05000 195 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 IFNA16P05015 189 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 PRKACGP22612 351 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 ACP1P24666 158 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 RRM2P31350 389 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 YAP1P46937 504 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 TUBA4AP68366 448 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 KCNC4Q03721 635 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 ARHGAP11BQ3KRB8 267 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 LAIR1Q6GTX8 287 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 TMIGD2Q96BF3 282 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 ZNF347Q96SE7 839 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 STACQ99469 402 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 QRSL1Q9H0R6 528 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 SMURF2Q9HAU4 748 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 DUSP22Q9NRW4 184 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 IFT80Q9P2H3 777 aaPredicted RBP16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 FTSJ1Q9UET6 329 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 ZIC2O95409 532 aaPredicted RBP16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 HPRP00739 348 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 FPR1P21462 350 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 SSTR4P31391 388 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 MAP3K8P41279 467 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 ARHGDIAP52565 204 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 PPP2R2BQ00005 443 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 BIKQ13323 160 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 ZNF267Q14586 743 aaPredicted RBP16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 MINDY4Q4G0A6 757 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 VWA2Q5GFL6 755 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 QSOX2Q6ZRP7 698 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 B3GNT8Q7Z7M8 397 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 FNDC8Q8TC99 324 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 BARD1Q99728 777 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 RBM4BQ9BQ04 359 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 PELOQ9BRX2 385 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 RBM4Q9BWF3 364 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 OCIAD1Q9NX40 245 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 TESMINQ9Y4I5 508 aa16.34■□□□□ 0.21
LYSMD4-203ENST00000378904 J3KTA2 159 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 FCMRO60667 390 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 SCRG1O75711 98 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 SNAP29O95721 258 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 GP1BAP07359 652 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 GALNSP34059 522 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 MERTKQ12866 999 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms