RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 PLAG1Q6DJT9 500 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 NET1Q7Z628 596 aaPredicted RBP12.01□□□□□ -0.49
CBWD3-203ENST00000377344 ZNF248Q8NDW4 579 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 SLC38A5Q8WUX1 472 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 ASB9Q96DX5 294 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 IMMP1LQ96LU5 166 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 STACQ99469 402 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 LMF2Q9BU23 707 aaKnown RBP12.01□□□□□ -0.49
CBWD3-203ENST00000377344 WWTR1Q9GZV5 400 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 TMEM38AQ9H6F2 299 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 LIN28AQ9H9Z2 209 aaKnown RBP12.01□□□□□ -0.49
CBWD3-203ENST00000377344 DUSP22Q9NRW4 184 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 SUCOQ9UBS9 1254 aaKnown RBP12.01□□□□□ -0.49
CBWD3-203ENST00000377344 ZNF223Q9UK11 482 aaPredicted RBP12.01□□□□□ -0.49
CBWD3-203ENST00000377344 PPIEQ9UNP9 301 aaKnown RBP12.01□□□□□ -0.49
CBWD3-203ENST00000377344 POMPQ9Y244 141 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 A8MVJ9 347 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 KLK10O43240 276 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 TLX3O43711 291 aaPredicted RBP12□□□□□ -0.49
CBWD3-203ENST00000377344 NKX2-2O95096 273 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 HPP00738 406 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 CELA2AP08217 269 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 ARAFP10398 606 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 PRKAR1AP10644 381 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 BMP2P12643 396 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 AQP1P29972 269 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 HPCAP84074 193 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 MS4A2Q01362 244 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 RBBP4Q09028 425 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 ATP1A1-AS1Q5TC04 95 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 GLYATQ6IB77 296 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 GALNT10Q86SR1 603 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 ANKFN1Q8N957 763 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 M1APQ8TC57 530 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 ADAMTS17Q8TE56 1095 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 RMND5BQ96G75 393 aaPredicted RBP12□□□□□ -0.49
CBWD3-203ENST00000377344 TMEM19Q96HH6 336 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 IP6K3Q96PC2 410 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 DEFB126Q9BYW3 111 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 A4GALTQ9NPC4 353 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 A0A1W2PQ72 361 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 GXYLT2A0PJZ3 443 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 CXCR6O00574 342 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 ARPC2O15144 300 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 ZFAND5O76080 213 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 TFPTP0C1Z6 253 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 CT45A8P0DMV1 189 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 CT45A9P0DMV2 189 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 ICAM2P13598 275 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 PCGF2P35227 344 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 PPICP45877 212 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 ERFP50548 548 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 NR0B1P51843 470 aaKnown RBP12□□□□□ -0.49
CBWD3-203ENST00000377344 POU6F2P78424 691 aaPredicted RBP12□□□□□ -0.49
CBWD3-203ENST00000377344 FLOT2Q14254 428 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 GNA13Q14344 377 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 CT45A2Q5DJT8 189 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 RPS26P11Q5JNZ5 115 aaPredicted RBP12□□□□□ -0.49
CBWD3-203ENST00000377344 CCNJQ5T5M9 372 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 FIGNL1Q6PIW4 674 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 CYP2R1Q6VVX0 501 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 NPSR1Q6W5P4 371 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 OLIG3Q7RTU3 272 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 DHFR2Q86XF0 187 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 HIPK4Q8NE63 616 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 OR4N2Q8NGD1 307 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 OR5L2Q8NGL0 311 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 ADIPOR1Q96A54 375 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 LCORQ96JN0 433 aaPredicted RBP12□□□□□ -0.49
CBWD3-203ENST00000377344 BTBD9Q96Q07 612 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 NXF5Q9H1B4 397 aaKnown RBP12□□□□□ -0.49
CBWD3-203ENST00000377344 CCDC86Q9H6F5 360 aaKnown RBP12□□□□□ -0.49
CBWD3-203ENST00000377344 GIN1Q9NXP7 522 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 MAGEL2Q9UJ55 1249 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 LIPT1Q9Y234 373 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 ANGPT4Q9Y264 503 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 GPR55Q9Y2T6 319 aaPredicted RBP12□□□□□ -0.49
CBWD3-203ENST00000377344 SNX13Q9Y5W8 968 aa12□□□□□ -0.49
CBWD3-203ENST00000377344 PRAMEF27A3QJZ7 478 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 TTC36A6NLP5 189 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 A8MUI8 341 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 NKX2-8O15522 239 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 SOX30O94993 753 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 GGT1P19440 569 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 HOXD11P31277 338 aaPredicted RBP11.99□□□□□ -0.49
CBWD3-203ENST00000377344 MAP3K8P41279 467 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 CRISP3P54108 245 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 DCAF7P61962 342 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 FUT5Q11128 374 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 VEZF1Q14119 521 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 LRRC23Q53EV4 343 aaPredicted RBP11.99□□□□□ -0.49
CBWD3-203ENST00000377344 EXOSC6Q5RKV6 272 aaKnown RBP11.99□□□□□ -0.49
CBWD3-203ENST00000377344 DCST2Q5T1A1 773 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 REEP3Q6NUK4 255 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 FAM13CQ8NE31 585 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 ELP5Q8TE02 316 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 FAM162AQ96A26 154 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 LRGUKQ96M69 825 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 BTBD2Q9BX70 525 aa11.99□□□□□ -0.49
CBWD3-203ENST00000377344 MMP25Q9NPA2 562 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms