RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 HOXB9P17482 250 aaPredicted RBP12.91□□□□□ -0.34
GPC6-201ENST00000377047 TNFRSF1BP20333 461 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 ANKRD54Q6NXT1 300 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 PPP1R3BQ86XI6 285 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 ZNF584Q8IVC4 421 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 NRMQ8IXM6 262 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 TANKQ92844 425 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 SLC30A2Q9BRI3 323 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 BEX2Q9BXY8 128 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 ZNF442Q9H7R0 627 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 BEX1Q9HBH7 125 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 GJB3O75712 270 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 GTF2F2P13984 249 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 THBS2P35442 1172 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 STK11Q15831 433 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 RTP4Q96DX8 246 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 LRR1Q96L50 414 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 ICKQ9UPZ9 632 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 ADAM18Q9Y3Q7 739 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 GOLGA4Q13439 2230 aaKnown RBP12.91□□□□□ -0.34
GPC6-201ENST00000377047 TDGQ13569 410 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 ZNF829Q3KNS6 432 aaPredicted RBP12.91□□□□□ -0.34
GPC6-201ENST00000377047 FCRLBQ6BAA4 426 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 TUBA3EQ6PEY2 450 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 ZNF765Q7L2R6 523 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 VTCN1Q7Z7D3 282 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 CDRT4Q8N9R6 151 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 OR2T4Q8NH00 348 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 SLC7A7Q9UM01 511 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 UGDHO60701 494 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 SLC19A2O60779 497 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 PPP1R3DO95685 299 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 CD83Q01151 205 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 SLC6A7Q99884 636 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 ULBP3Q9BZM4 244 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 RASAL1O95294 804 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 TPTEP56180 551 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 PIGFQ07326 219 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 TMEM201Q5SNT2 666 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 ARHGAP12Q8IWW6 846 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 PIANPQ8IYJ0 282 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 SCML4Q8N228 414 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 MINDY1Q8N5J2 469 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 POGLUT1Q8NBL1 392 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 RDH12Q96NR8 316 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 CSNK1G1Q9HCP0 422 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 HSFX1Q9UBD0 423 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 NPIPA5A0A0B4J1W7 369 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 NPIPA7E9PJI5 369 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 NPIPA8P0DM63 369 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 CSNK1EP49674 416 aaKnown RBP12.9□□□□□ -0.34
GPC6-201ENST00000377047 ZNF140P52738 457 aaPredicted RBP12.9□□□□□ -0.34
GPC6-201ENST00000377047 EFR3AQ14156 821 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 PLBD1Q6P4A8 553 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 ACOT4Q8N9L9 421 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 VN1R2Q8NFZ6 395 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 CCL26Q9Y258 94 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 ALG5Q9Y673 324 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 MAS1P04201 325 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 RBMXP38159 391 aaKnown RBP12.9□□□□□ -0.34
GPC6-201ENST00000377047 SIX1Q15475 284 aaPredicted RBP12.9□□□□□ -0.34
GPC6-201ENST00000377047 NAGSQ8N159 534 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 TEX26Q8N6G2 289 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 MAGIXQ9H6Y5 334 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 CCM2LQ9NUG4 571 aaPredicted RBP12.9□□□□□ -0.34
GPC6-201ENST00000377047 EXTL2Q9UBQ6 330 aa12.9□□□□□ -0.34
GPC6-201ENST00000377047 ZNF850A8MQ14 1090 aa12.9□□□□□ -0.35
GPC6-201ENST00000377047 POU3F2P20265 443 aaPredicted RBP12.9□□□□□ -0.35
GPC6-201ENST00000377047 RSU1Q15404 277 aa12.9□□□□□ -0.35
GPC6-201ENST00000377047 RAB41Q5JT25 222 aa12.9□□□□□ -0.35
GPC6-201ENST00000377047 SLC37A3Q8NCC5 494 aa12.9□□□□□ -0.35
GPC6-201ENST00000377047 MYRFLQ96LU7 910 aa12.9□□□□□ -0.35
GPC6-201ENST00000377047 DNTTIP1Q9H147 329 aa12.9□□□□□ -0.35
GPC6-201ENST00000377047 BAIAP2Q9UQB8 552 aa12.9□□□□□ -0.35
GPC6-201ENST00000377047 OR6C70A6NIJ9 312 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 PHYHO14832 338 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 AQP9O43315 295 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 AMY2BP19961 511 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 DDCP20711 480 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 PSMB5P28074 263 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 APLNRP35414 380 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 SLC26A5P58743 744 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 FAM189BP81408 668 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 ZNF33BQ06732 778 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 RGNQ15493 299 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 MLF2Q15773 248 aaPredicted RBP12.89□□□□□ -0.35
GPC6-201ENST00000377047 ZNF404Q494X3 552 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 TMEM69Q5SWH9 247 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 DTX3Q8N9I9 347 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 OR52R1Q8NGF1 315 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 HDAC2Q92769 488 aaKnown RBP12.89□□□□□ -0.35
GPC6-201ENST00000377047 TIMM29Q9BSF4 260 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 ZBTB42B2RXF5 422 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 ARHGEF15O94989 841 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 C1SP09871 688 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 CSNK1DP48730 415 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 GRK1Q15835 563 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 TCEAL3Q969E4 200 aa12.89□□□□□ -0.35
GPC6-201ENST00000377047 SLC25A44Q96H78 314 aaPredicted RBP12.89□□□□□ -0.35
GPC6-201ENST00000377047 NSG1A0A0A6YYJ2 146 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms