RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CYP4B1P13584 511 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 CTSSP25774 331 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 TIA1P31483 386 aaKnown RBP eCLIP19.16■□□□□ 0.66
VSX1-201ENST00000376707 KRT20P35900 424 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 FLYWCH1Q4VC44 716 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 POMZP3Q6PJE2 187 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 MBD3L2Q8NHZ7 208 aaPredicted RBP19.16■□□□□ 0.66
VSX1-201ENST00000376707 RDH11Q8TC12 318 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 C16orf78Q8WTQ4 265 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 FAM222BQ8WU58 562 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 UBLCP1Q8WVY7 318 aaPredicted RBP19.16■□□□□ 0.66
VSX1-201ENST00000376707 APIPQ96GX9 242 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 BTBD9Q96Q07 612 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 CLEC4MQ9H2X3 399 aaPredicted RBP19.16■□□□□ 0.66
VSX1-201ENST00000376707 SIRT5Q9NXA8 310 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 SENP1Q9P0U3 644 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 TIMM22Q9Y584 194 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 ARHGAP21Q5T5U3 1957 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 EEF1E1-BLOC1S5C9J1V9 151 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 UBFD1O14562 309 aaKnown RBP19.15■□□□□ 0.66
VSX1-201ENST00000376707 EEF1E1O43324 174 aaKnown RBP19.15■□□□□ 0.66
VSX1-201ENST00000376707 ERN1O75460 977 aaKnown RBP19.15■□□□□ 0.66
VSX1-201ENST00000376707 MYL2P10916 166 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 CRHR1P34998 444 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 OPRM1P35372 400 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 AGFG1P52594 562 aaKnown RBP19.15■□□□□ 0.66
VSX1-201ENST00000376707 IST1P53990 364 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 BTKQ06187 659 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 CCDC153Q494R4 210 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 ENPP6Q6UWR7 440 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 WDSUB1Q8N9V3 476 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 ZPLD1Q8TCW7 415 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 DTNBP1Q96EV8 351 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 SLC35A4Q96G79 324 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 KCNA7Q96RP8 456 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 ADOQ96SZ5 270 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 EBPLQ9BY08 206 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 OR2B2Q9GZK3 357 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 SLC35C2Q9NQQ7 365 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 RASSF1Q9NS23 344 aa19.15■□□□□ 0.66
VSX1-201ENST00000376707 SPG11Q96JI7 2443 aa19.14■□□□□ 0.66
VSX1-201ENST00000376707 EXPH5Q8NEV8 1989 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 H0Y3Z8 333 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 H3BQF6 201 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 PLIN3O60664 434 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 NME6O75414 186 aaPredicted RBP19.14■□□□□ 0.65
VSX1-201ENST00000376707 ANXA4P09525 319 aaPredicted RBP19.14■□□□□ 0.65
VSX1-201ENST00000376707 CT45A8P0DMV1 189 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 CT45A9P0DMV2 189 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 CPN1P15169 458 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 IL12BP29460 328 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 MPIP34949 423 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 GSTM5P46439 218 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 SLCO1A2P46721 670 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 CCT5P48643 541 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 DGKQP52824 942 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 CORO7P57737 925 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 DNAJB13P59910 316 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 PSPHP78330 225 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 SRYQ05066 204 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 EFR3AQ14156 821 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 CT45A2Q5DJT8 189 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 SPDYAQ5MJ70 313 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 SCIMPQ6UWF3 145 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 IFNEQ86WN2 208 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 KIF18BQ86Y91 864 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 PLCZ1Q86YW0 608 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 FAM9CQ8IZT9 166 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 CCNYL1Q8N7R7 359 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 GOT1L1Q8NHS2 421 aaPredicted RBP19.14■□□□□ 0.65
VSX1-201ENST00000376707 CDC26Q8NHZ8 85 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 NINJ1Q92982 152 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 RMND5BQ96G75 393 aaPredicted RBP19.14■□□□□ 0.65
VSX1-201ENST00000376707 VSTM2LQ96N03 204 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 BBS4Q96RK4 519 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 MID1IP1Q9NPA3 183 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 TAS2R10Q9NYW0 307 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 GRID1Q9ULK0 1009 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 WIF1Q9Y5W5 379 aa19.14■□□□□ 0.65
VSX1-201ENST00000376707 A6NNC1 897 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 TMIGD3P0DMS9 266 aaPredicted RBP19.13■□□□□ 0.65
VSX1-201ENST00000376707 TACR1P25103 407 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 FOXA1P55317 472 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 CEBPEQ15744 281 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 FRMD7Q6ZUT3 714 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 LARP4Q71RC2 724 aaKnown RBP eCLIP19.13■□□□□ 0.65
VSX1-201ENST00000376707 TRIM42Q8IWZ5 723 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 C9orf106Q8NAJ2 232 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 TUBA1CQ9BQE3 449 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 SHCBP1LQ9BZQ2 653 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 FOLH1BQ9HBA9 442 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 CCM2LQ9NUG4 571 aaPredicted RBP19.13■□□□□ 0.65
VSX1-201ENST00000376707 TAS2R9Q9NYW1 312 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 CBLCQ9ULV8 474 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 EDARQ9UNE0 448 aa19.13■□□□□ 0.65
VSX1-201ENST00000376707 FREM3P0C091 2139 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 FAM221AA4D161 298 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 TUBAL3A6NHL2 446 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 PLOD3O60568 738 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 TSPAN2O60636 221 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms