RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 NTSP30990 170 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 PTGDSP41222 190 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 MASP1P48740 699 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 PSG6Q00889 435 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 CHI3L2Q15782 390 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 XKR7Q5GH72 579 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 ZNF585AQ6P3V2 769 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 SLC44A2Q8IWA5 706 aaPredicted RBP13.05□□□□□ -0.32
CLCN6-203ENST00000376490 EID3Q8N140 333 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 PGM2Q96G03 612 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 PPP3R2Q96LZ3 170 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 COL21A1Q96P44 957 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 ADOQ96SZ5 270 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 C20orf27Q9GZN8 174 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 SLC6A15Q9H2J7 730 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 GALNT9Q9HCQ5 603 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 ACKR4Q9NPB9 350 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 QPCTLQ9NXS2 382 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 SH3BP4Q9P0V3 963 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 SPRR3Q9UBC9 169 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 ACAD8Q9UKU7 415 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 TMED5Q9Y3A6 229 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 KIAA1549Q9HCM3 1950 aa13.05□□□□□ -0.32
CLCN6-203ENST00000376490 OR6C70A6NIJ9 312 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 BCKDKO14874 412 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 TM9SF1O15321 606 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 TSPAN2O60636 221 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 TBX19O60806 448 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 HSPA4LO95757 839 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 DHRS4L1P0CG22 281 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 AGAP20933 346 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 HTR1EP28566 365 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 PMPCAQ10713 525 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 HSPB3Q12988 150 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 C6orf136Q5SQH8 315 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 TIGD3Q6B0B8 471 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 TMEM211Q6ICI0 200 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 SLC30A6Q6NXT4 461 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 ANGPTL8Q6UXH0 198 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 LRIG3Q6UXM1 1119 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 LARP4Q71RC2 724 aaKnown RBP eCLIP13.04□□□□□ -0.32
CLCN6-203ENST00000376490 WDR53Q7Z5U6 358 aaPredicted RBP13.04□□□□□ -0.32
CLCN6-203ENST00000376490 CROCCP2Q86T23 111 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 OR2L13Q8N349 312 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 LIX1Q8N485 282 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 OR1J4Q8NGS1 313 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 NEIL3Q8TAT5 605 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 NUDT8Q8WV74 236 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 SARAFQ96BY9 339 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 PPCDCQ96CD2 204 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 TMEM41AQ96HV5 264 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 C1orf50Q9BV19 199 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 UBQLN3Q9H347 655 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 ALKBH4Q9NXW9 302 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 B4GALT7Q9UBV7 327 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 KLF2Q9Y5W3 355 aaPredicted RBP13.04□□□□□ -0.32
CLCN6-203ENST00000376490 CELSR2Q9HCU4 2923 aa13.04□□□□□ -0.32
CLCN6-203ENST00000376490 PKDREJQ9NTG1 2253 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 PDPK1O15530 556 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 COQ9O75208 318 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 SLITRK5O94991 958 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 PSMG1O95456 288 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 CLDN14O95500 239 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 SERPINE1P05121 402 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 EFNA1P20827 205 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-203ENST00000376490 ACVR2AP27037 513 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 PTPN6P29350 595 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 ASMTP46597 345 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 PNLIPRP2P54317 469 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 MANFP55145 182 aaKnown RBP13.03□□□□□ -0.32
CLCN6-203ENST00000376490 NUP107P57740 925 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 ABCE1P61221 599 aaKnown RBP13.03□□□□□ -0.32
CLCN6-203ENST00000376490 ZNF155Q12901 538 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-203ENST00000376490 GAB1Q13480 694 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 PDE7AQ13946 482 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 TOMM20Q15388 145 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 ZNF630Q2M218 657 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-203ENST00000376490 ATP6AP1LQ52LC2 224 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 BEND6Q5SZJ8 279 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-203ENST00000376490 WLSQ5T9L3 541 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 IL23RQ5VWK5 629 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 RTL6Q6ICC9 239 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 TMEM81Q6P7N7 255 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 ZNF781Q8N8C0 355 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 EFHD2Q96C19 240 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-203ENST00000376490 SDCCAG3Q96C92 435 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 TMCO6Q96DC7 493 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 SLC35A4Q96G79 324 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 ZNF764Q96H86 408 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-203ENST00000376490 PAIP2Q9BPZ3 127 aaKnown RBP13.03□□□□□ -0.32
CLCN6-203ENST00000376490 OSBPL11Q9BXB4 747 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 DDX18Q9NVP1 670 aaKnown RBP13.03□□□□□ -0.32
CLCN6-203ENST00000376490 KLRF1Q9NZS2 232 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 C15orf41Q9Y2V0 281 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 OR10H1Q9Y4A9 318 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 ACTL7BQ9Y614 415 aa13.03□□□□□ -0.32
CLCN6-203ENST00000376490 PRAMEF25A6NGN4 478 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 TMEM114B3SHH9 223 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 ZWINTO95229 277 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 HPNP05981 417 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms