RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 PIM3Q86V86 326 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 TMEM200AQ86VY9 491 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 METTL21AQ8WXB1 218 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 ISG20Q96AZ6 181 aaKnown RBP8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 C16orf58Q96GQ5 468 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 MED18Q9BUE0 208 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 OR51I1Q9H343 314 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 OR2A25A4D2G3 310 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 DPEP1P16444 411 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 OR5T3Q8NGG3 340 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 OR2L8Q8NGY9 312 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 SCGB1C1Q8TD33 95 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 NUS1Q96E22 293 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 RBP7Q96R05 134 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 MTHFD2LQ9H903 347 aaPredicted RBP8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 PPP4R1LQ9P1A2 415 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 CACNA1HO95180 2353 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 TBC1D3KA0A087X1G2 549 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 TBC1D3FA6NER0 549 aaPredicted RBP8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 CPSF4LA6NMK7 179 aaKnown RBP8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 IFNA5P01569 189 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 CSTBP04080 98 aaKnown RBP8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 GIPP09681 153 aaPredicted RBP8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 PYCR1P32322 319 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 TBC1D3GQ6DHY5 549 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 GDPD4Q6W3E5 623 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 SERINC5Q86VE9 423 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 IFNL1Q8IU54 200 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 ZNF565Q8N9K5 539 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 OR52N1Q8NH53 320 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 SORCS1Q8WY21 1168 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 DHRS1Q96LJ7 313 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 CCNL2Q96S94 520 aaPredicted RBP8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 SLAMF7Q9NQ25 335 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 WASH6PQ9NQA3 447 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 ZFP37Q9Y6Q3 630 aaPredicted RBP8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 SEMA3BQ13214 749 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 CCNJQ5T5M9 372 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 SHFQ7M4L6 423 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 SLC46A3Q7Z3Q1 461 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 ZNF101Q8IZC7 436 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 RNF141Q8WVD5 230 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 MS4A4EQ96PG1 132 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 TBL1XR1Q9BZK7 514 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 ANKRD34BA5PLL1 514 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 HBE1P02100 147 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 CD34P28906 385 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 GALK2Q01415 458 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 NRARPQ7Z6K4 114 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 LIX1LQ8IVB5 337 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 CCDC54Q8NEL0 328 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 ANKK1Q8NFD2 765 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 OR4K14Q8NGD5 310 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 OR51G2Q8NGK0 314 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 C11orf49Q9H6J7 331 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 SLC6A5Q9Y345 797 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 RIPK3Q9Y572 518 aa8.39□□□□□ -1.07
SHROOM4-202ENST00000376020 OR5K4A6NMS3 321 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 ARPC5O15511 151 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 SH3BGRLO75368 114 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 CXCR1P25024 350 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 TMEM220Q6QAJ8 160 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 CADM2Q8N3J6 435 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 NEK7Q8TDX7 302 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 ACOT11Q8WXI4 607 aaPredicted RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 SMARCD2Q92925 531 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 PDGFDQ9GZP0 370 aaPredicted RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 WRAP73Q9P2S5 460 aaPredicted RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 DDX60LQ5H9U9 1706 aaKnown RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 DOCK6Q96HP0 2047 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 SLC33A1O00400 549 aaPredicted RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 ITPKBP27987 946 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 HSD11B1P28845 292 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 GPR17Q13304 367 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 RNF212Q495C1 297 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 FERD3LQ96RJ6 166 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 POLDIP3Q9BY77 421 aaKnown RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 UFSP2Q9NUQ7 469 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 DOCK9Q9BZ29 2069 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 TEX13DA0A0J9YY54 714 aaPredicted RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 FOXE1O00358 373 aaPredicted RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 MT-CO2P00403 227 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 CYP17A1P05093 508 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 AMD1P17707 334 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 S100A11P31949 105 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 ETV3P41162 512 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 THAP4Q8WY91 577 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 ADAD1Q96M93 576 aaKnown RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 TMEM98Q9Y2Y6 226 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 MRPS23Q9Y3D9 190 aaKnown RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 RAD51DO75771 328 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 MMP2P08253 660 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 MAT2AP31153 395 aaKnown RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 TNFSF8P32971 234 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 SHMT2P34897 504 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 TAGLN2P37802 199 aaKnown RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 B3GNT8Q7Z7M8 397 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 GPR148Q8TDV2 347 aa8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 BARD1Q99728 777 aaKnown RBP8.38□□□□□ -1.07
SHROOM4-202ENST00000376020 GABARAPL3Q9BY60 117 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms