RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 COX10Q12887 443 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 ZNF658BQ4V348 819 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 SLC25A30Q5SVS4 291 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 ZNF57Q68EA5 555 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 MARCH9Q86YJ5 346 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 ANKK1Q8NFD2 765 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 SUN5Q8TC36 379 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 SMG7Q92540 1137 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 ARHGAP9Q9BRR9 750 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 QRSL1Q9H0R6 528 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 FGF20Q9NP95 211 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 TEX10Q9NXF1 929 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 ING3Q9NXR8 418 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 SLC23A1Q9UHI7 598 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 MSRAQ9UJ68 235 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 CLCA2Q9UQC9 943 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 PCDHGB7Q9Y5F8 929 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 ZSCAN5BA6NJL1 495 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 PRODHO43272 600 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 PRKAG1P54619 331 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 CLDN20P56880 219 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 RRAS2P62070 204 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 DBPQ10586 325 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 TIGD3Q6B0B8 471 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 LIPIQ6XZB0 460 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 ANKRD53Q8N9V6 530 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 CLIP3Q96DZ5 547 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 ZC3HAV1LQ96H79 300 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 NIPAL2Q9H841 368 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 TDP1Q9NUW8 608 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 CNIH4Q9P003 139 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 A0A1B0GVC2 190 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 A6NIN4 97 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 WASH3PC4AMC7 463 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 PROM1O43490 865 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 FRS3O43559 492 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 ALPPL2P10696 532 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 ACADMP11310 421 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 FGF9P31371 208 aaPredicted RBP13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 UQCRC1P31930 480 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 BSGP35613 385 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 BUD31P41223 144 aaPredicted RBP13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 INPP1P49441 399 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 METAP1P53582 386 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 PCBP4P57723 403 aaKnown RBP13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 ZNF791Q3KP31 576 aaPredicted RBP13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 PRAMEF14Q5SWL7 426 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 PRAMEF13Q5VWM6 474 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 C1orf94Q6P1W5 598 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 PRICKLE2Q7Z3G6 844 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 SIX5Q8N196 739 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 SLC37A3Q8NCC5 494 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 MED30Q96HR3 178 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 MARVELD1Q9BSK0 173 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 MRPS23Q9Y3D9 190 aaKnown RBP13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 PLXNA2O75051 1894 aa13.27□□□□□ -0.28
CLCNKA-202ENST00000375692 A0A1W2PQ72 361 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 INMT-MINDY4F8WBC2 141 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 GTPBP1O00178 669 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 PPM1DO15297 605 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 TMPRSS11DO60235 418 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 HNRNPA1P09651 372 aaKnown RBP eCLIP13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 DUSP6Q16828 381 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 KHDRBS2Q5VWX1 349 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 CD200R1LQ6Q8B3 271 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 CD300LDQ6UXZ3 194 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 SLC36A4Q6YBV0 504 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 ASB18Q6ZVZ8 466 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 AMIGO1Q86WK6 493 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 FAM129CQ86XR2 697 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 ZNF485Q8NCK3 441 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 NEIL3Q8TAT5 605 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 RNF32Q9H0A6 362 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 CUEDC1Q9NWM3 386 aaPredicted RBP13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 A0A087WUU8 490 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 TRDV1A0A1B0GX56 115 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 GABRPO00591 440 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 HRO43593 1189 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 LANCL1O43813 399 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 LILRB5O75023 590 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 PRKRAO75569 313 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 VIPR2P41587 438 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 SLC1A3P43003 542 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 CSTF1Q05048 431 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 ENTPD8Q5MY95 495 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 KIAA1161Q6NSJ0 714 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 SLC27A4Q6P1M0 643 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 C11orf96Q7Z7L8 435 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 FAM109AQ8N4B1 249 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 ARIH2OSQ8N7S6 290 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 OR4M2Q8NGB6 313 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 OR5AR1Q8NGP9 310 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 KLK6Q92876 244 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 KCNJ15Q99712 375 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 LHX9Q9NQ69 397 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 MRPS18AQ9NVS2 196 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 IL20RAQ9UHF4 553 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 PCYT1BQ9Y5K3 369 aaPredicted RBP13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 WNT6Q9Y6F9 365 aa13.27□□□□□ -0.29
CLCNKA-202ENST00000375692 CDH10Q9Y6N8 788 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms