RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 PINLYPA6NC86 204 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 HCN1O60741 890 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 OR2J2O76002 312 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 TGDSO95455 350 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 ALDOCP09972 364 aaKnown RBP11.18□□□□□ -0.62
LSM2-208ENST00000375661 G6PDP11413 515 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 PRPS2P11908 318 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 DDCP20711 480 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 MAPK1P28482 360 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 STT3AP46977 705 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 ALDH9A1P49189 494 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 MAN2A2P49641 1150 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 IDH3AP50213 366 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 AQP5P55064 265 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 DUSP2Q05923 314 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 MAD2L1Q13257 205 aaPredicted RBP11.18□□□□□ -0.62
LSM2-208ENST00000375661 SERTAD2Q14140 314 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 PTGR1Q14914 329 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 C1orf185Q5T7R7 199 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 WLSQ5T9L3 541 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 RIPPLY2Q5TAB7 128 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 RTL6Q6ICC9 239 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 CGB2Q6NT52 195 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 FAM180BQ6P0A1 224 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 IL20RBQ6UXL0 311 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 IKBIPQ70UQ0 350 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 ZZZ3Q8IYH5 903 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 OR4K14Q8NGD5 310 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 OR8K3Q8NH51 312 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 GOT1L1Q8NHS2 421 aaPredicted RBP11.18□□□□□ -0.62
LSM2-208ENST00000375661 NUDT8Q8WV74 236 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 DAZLQ92904 295 aaKnown RBP11.18□□□□□ -0.62
LSM2-208ENST00000375661 GFM2Q969S9 779 aaKnown RBP11.18□□□□□ -0.62
LSM2-208ENST00000375661 PPWD1Q96BP3 646 aaKnown RBP11.18□□□□□ -0.62
LSM2-208ENST00000375661 CNRIP1Q96F85 164 aaPredicted RBP11.18□□□□□ -0.62
LSM2-208ENST00000375661 LRRC46Q96FV0 321 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 THOC1Q96FV9 657 aaKnown RBP11.18□□□□□ -0.62
LSM2-208ENST00000375661 ZNF317Q96PQ6 595 aaPredicted RBP11.18□□□□□ -0.62
LSM2-208ENST00000375661 GPATCH1Q9BRR8 931 aaKnown RBP11.18□□□□□ -0.62
LSM2-208ENST00000375661 FGFR1OP2Q9NVK5 253 aa11.18□□□□□ -0.62
LSM2-208ENST00000375661 EIF3LQ9Y262 564 aaKnown RBP11.18□□□□□ -0.62
LSM2-208ENST00000375661 SYT5O00445 386 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 AKAP10O43572 662 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 PRKNO60260 465 aaPredicted RBP11.17□□□□□ -0.62
LSM2-208ENST00000375661 TBX19O60806 448 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 OR6B1O95007 311 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 LRATO95237 230 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 VIMP08670 466 aaKnown RBP11.17□□□□□ -0.62
LSM2-208ENST00000375661 SLC35E2P0CK97 266 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 PIK3R1P27986 724 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 SOX3P41225 446 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 XKP51811 444 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 NR0B1P51843 470 aaKnown RBP11.17□□□□□ -0.62
LSM2-208ENST00000375661 ADAM8P78325 824 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 BIKQ13323 160 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 PDE7AQ13946 482 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 SLC10A1Q14973 349 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 ELAVL1Q15717 326 aaKnown RBP11.17□□□□□ -0.62
LSM2-208ENST00000375661 LSM12Q3MHD2 195 aaKnown RBP11.17□□□□□ -0.62
LSM2-208ENST00000375661 ZNF385BQ569K4 471 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 TMEM198Q66K66 360 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 OPN5Q6U736 354 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 HSDL2Q6YN16 418 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 BIVMQ86UB2 503 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 LIX1LQ8IVB5 337 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 TMEM251Q8N6I4 163 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 KRTCAP2Q8N6L1 136 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 MORN4Q8NDC4 146 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 C7orf57Q8NEG2 295 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 CEP70Q8NHQ1 597 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 RFWD2Q8NHY2 731 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 FAM222BQ8WU58 562 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 PTPMT1Q8WUK0 201 aaPredicted RBP11.17□□□□□ -0.62
LSM2-208ENST00000375661 EXOSC8Q96B26 276 aaKnown RBP11.17□□□□□ -0.62
LSM2-208ENST00000375661 KLHL29Q96CT2 875 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 REEP4Q9H6H4 257 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 SACM1LQ9NTJ5 587 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 RYDENQ9NUL5 291 aaKnown RBP11.17□□□□□ -0.62
LSM2-208ENST00000375661 TAS2R7Q9NYW3 318 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 NOP53Q9NZM5 478 aaKnown RBP11.17□□□□□ -0.62
LSM2-208ENST00000375661 EHD3Q9NZN3 535 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 UTS2RQ9UKP6 389 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 ACAD8Q9UKU7 415 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 PLEKHA6Q9Y2H5 1048 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 LIPGQ9Y5X9 500 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 NCKAP5O14513 1909 aa11.17□□□□□ -0.62
LSM2-208ENST00000375661 A0A0G2JMM0 328 aa11.16□□□□□ -0.62
LSM2-208ENST00000375661 A0A1W2PPB8 328 aa11.16□□□□□ -0.62
LSM2-208ENST00000375661 A0A1W2PRS3 328 aa11.16□□□□□ -0.62
LSM2-208ENST00000375661 A6NNC1 897 aa11.16□□□□□ -0.62
LSM2-208ENST00000375661 HSPB2A8KAH6 182 aa11.16□□□□□ -0.62
LSM2-208ENST00000375661 KIR3DP1A8MWS1 328 aa11.16□□□□□ -0.62
LSM2-208ENST00000375661 ANKRD28O15084 1053 aa11.16□□□□□ -0.62
LSM2-208ENST00000375661 ERAL1O75616 437 aaKnown RBP11.16□□□□□ -0.62
LSM2-208ENST00000375661 IFNA16P05015 189 aa11.16□□□□□ -0.62
LSM2-208ENST00000375661 CPMP14384 443 aa11.16□□□□□ -0.62
LSM2-208ENST00000375661 SOX18P35713 384 aa11.16□□□□□ -0.62
LSM2-208ENST00000375661 FEN1P39748 380 aaKnown RBP11.16□□□□□ -0.62
LSM2-208ENST00000375661 ADH7P40394 386 aa11.16□□□□□ -0.62
LSM2-208ENST00000375661 MAGEA5P43359 124 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms