RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 TUBB3Q13509 450 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 TMEM150AQ86TG1 271 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 EID2Q8N6I1 236 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 NAXEQ8NCW5 288 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 OR52R1Q8NGF1 315 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 TMEM234Q8WY98 164 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 DPH1Q9BZG8 443 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 PPP4R1LQ9P1A2 415 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 DSG2Q14126 1118 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 ASB18Q6ZVZ8 466 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 LILRA2Q8N149 483 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 TMIGD2Q96BF3 282 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 ISOC1Q96CN7 298 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 SLC41A3Q96GZ6 507 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 J3KTA2 159 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 TP53I11O14683 189 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 PRAMEF2O60811 474 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 VNN2O95498 520 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 AHRP35869 848 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 SLC19A1P41440 591 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 HLCSP50747 726 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 EMP2P54851 167 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 E2F2Q14209 437 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 LTB4RQ15722 352 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 BTBD16Q32M84 506 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 BCL7AQ4VC05 210 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 NKAIN2Q5VXU1 208 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 OR5M10Q6IEU7 315 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 SGTBQ96EQ0 304 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 TREX2Q9BQ50 279 aaPredicted RBP16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 MS4A8Q9BY19 250 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 CRISPLD2Q9H0B8 497 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 TMEM185BQ9H7F4 350 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 TMEM45AQ9NWC5 275 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 GPR75O95800 540 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 AK1P00568 194 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 ACY1Q03154 408 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 TMEM215Q68D42 235 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 FCRLBQ6BAA4 426 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 OR6C4Q8NGE1 309 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 C1orf216Q8TAB5 229 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 OR1F2PQ96R84 312 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 GORASP2Q9H8Y8 452 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 SPHK1Q9NYA1 384 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 ATG4BQ9Y4P1 393 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 CROCCQ5TZA2 2017 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 CBFA2T3O75081 653 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 HYAL1Q12794 435 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 TSPYL5Q86VY4 417 aaPredicted RBP16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 NR4A3Q92570 626 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 KIAA1143Q96AT1 154 aaPredicted RBP16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 CMKLR1Q99788 373 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 PDCD10Q9BUL8 212 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 LDAHQ9H6V9 325 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 EPHA6Q9UF33 1036 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 DKKL1Q9UK85 242 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 PCDHGB1Q9Y5G3 927 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 PCDHA9Q9Y5H5 950 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 GRXCR2A6NFK2 248 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 GFYI3L273 518 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 WWP2O00308 870 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 NOS1APO75052 506 aaPredicted RBP16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 OPRD1P41143 372 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 CHRNEQ04844 493 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 HDDC2Q7Z4H3 204 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 PEG10Q86TG7 708 aaKnown RBP16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 VRK2Q86Y07 508 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 ZNF683Q8IZ20 524 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 PELI3Q8N2H9 469 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 LRRC17Q8N6Y2 441 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 IL17RCQ8NAC3 791 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 ZNF548Q8NEK5 533 aaPredicted RBP16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 UBTD2Q8WUN7 234 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 NSMAFQ92636 917 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 TANKQ92844 425 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 CPPED1Q9BRF8 314 aaPredicted RBP16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 LAMP5Q9UJQ1 280 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 OR51B4Q9Y5P0 310 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 TRAPPC13A5PLN9 417 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 FAM25EA8MYX2 175 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 BMP1P13497 986 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 CCNOP22674 350 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 CHAF1BQ13112 559 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 SERTAD2Q14140 314 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 ALG1LQ6GMV1 187 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 PLBD1Q6P4A8 553 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 CYHR1Q6ZMK1 362 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 TECPR1Q7Z6L1 1165 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 OR52E2Q8NGJ4 325 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 SAMD8Q96LT4 415 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 MMP17Q9ULZ9 603 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 SLC7A7Q9UM01 511 aa16.93■□□□□ 0.3
PTPDC1-202ENST00000375360 FAM171A2A8MVW0 826 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 DHFRP00374 187 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 ADAP00813 363 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 SPARCP09486 303 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 SPHARQ15513 63 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 MICAQ29983 383 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms