RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ASB4Q9Y574 426 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 PLCH1Q4KWH8 1693 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 SLC16A6O15403 523 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 NARSO43776 548 aaKnown RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 HMGN2P05204 90 aaKnown RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 SPARCP09486 303 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 MTHFD2P13995 350 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 GIPRP48546 466 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 VSX2P58304 361 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 ADARB1P78563 741 aaKnown RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 DHCR24Q15392 516 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 KIF18BQ86Y91 864 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 CYB561A3Q8NBI2 242 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 SGCDQ92629 289 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 JSRP1Q96MG2 331 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 ALG8Q9BVK2 526 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 MYNNQ9NPC7 610 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 SLC39A1Q9NY26 324 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 LOC105369274A0A096LPK9 316 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 C11orf98E9PRG8 122 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 MEN1O00255 615 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 RNF13O43567 381 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 CDC123O75794 336 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 ADH1BP00325 375 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 ITGA5P08648 1049 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 ADORA3P0DMS8 318 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 PIGAP37287 484 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 FRKP42685 505 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 PITPNBP48739 271 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 CTSCP53634 463 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 RPS21P63220 83 aaKnown RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 SF3A2Q15428 464 aaKnown RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 ITPRIPL2Q3MIP1 535 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 AGAP7PQ5VUJ5 663 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 SBSNQ6UWP8 590 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 OR4N4Q8N0Y3 316 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 WDR20Q8TBZ3 569 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 G6PC3Q9BUM1 346 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 ACTRT3Q9BYD9 372 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 OR10A4Q9H209 315 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 PRODH2Q9UF12 536 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 USP54Q70EL1 1684 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 TEX13DA0A0J9YY54 714 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 A0A1B0GVI7 797 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 CHP2O43745 196 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 CSTBP04080 98 aaKnown RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 HCKP08631 526 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 JUNBP17275 347 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 HOXC13P31276 330 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 ALG10BQ5I7T1 473 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 TMEM207Q6UWW9 146 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 OR51L1Q8NGJ5 315 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 OR5D16Q8NGK9 328 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 ZNF480Q8WV37 535 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 GSKIPQ9P0R6 139 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 NUP205Q92621 2012 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 HCRTR2O43614 444 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 IL1AP01583 271 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 CYBAP13498 195 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 CHMP24386 653 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 MLLT11Q13015 90 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 HSD11B1LQ7Z5J1 315 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 ZNF584Q8IVC4 421 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 GALNT6Q8NCL4 622 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 SORBS1Q9BX66 1292 aaKnown RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 KLF16Q9BXK1 252 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-203ENST00000375274 ATG5Q9H1Y0 275 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 PRTFDC1Q9NRG1 225 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 KLK4Q9Y5K2 254 aa10.93□□□□□ -0.66
PTCH1-203ENST00000375274 A0A1B0GTW7 788 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 CASC3O15234 703 aaKnown RBP10.92□□□□□ -0.66
PTCH1-203ENST00000375274 FUCA1P04066 466 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 GRPRP30550 384 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 ARRB2P32121 409 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 SUOXP51687 545 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 ART1P52961 327 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 LEXMQ3ZCV2 418 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 MORN1Q5T089 497 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 STEAP3Q658P3 488 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 NADSYN1Q6IA69 706 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 TCEAL8Q8IYN2 117 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 OR8J2Q8NGG1 315 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 HRASLS5Q96KN8 279 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 DPH1Q9BZG8 443 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 ARHGAP39Q9C0H5 1083 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 SAP130Q9H0E3 1048 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 A0A1B0GUL6 1792 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 TAF1P21675 1872 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 RPS15AP62244 130 aaKnown RBP10.92□□□□□ -0.66
PTCH1-203ENST00000375274 PTPRRQ15256 657 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 MPP7Q5T2T1 576 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 TBPL2Q6SJ96 375 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 TRIM46Q7Z4K8 759 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 MFSD6LQ8IWD5 586 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 SNAPC3Q92966 411 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 R3HDMLQ9H3Y0 253 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 TMEM185BQ9H7F4 350 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 PELI2Q9HAT8 420 aa10.92□□□□□ -0.66
PTCH1-203ENST00000375274 RXFP3Q9NSD7 469 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms