RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TMBIM6P55061 237 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 MGAT2Q10469 447 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 ARHGAP11BQ3KRB8 267 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 AHSA2Q719I0 299 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 IPCEF1Q8WWN9 437 aaPredicted RBP18.31■□□□□ 0.52
HDAC1-201ENST00000373548 TCTN2Q96GX1 697 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 SPACA7Q96KW9 195 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 CTPS2Q9NRF8 586 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 PLCXD1Q9NUJ7 323 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 UCKL1Q9NWZ5 548 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 A0A0A6YYC8 382 aaPredicted RBP18.3■□□□□ 0.52
HDAC1-201ENST00000373548 TRIM64BA6NI03 449 aa18.3■□□□□ 0.52
HDAC1-201ENST00000373548 ZNF99A8MXY4 864 aaPredicted RBP18.3■□□□□ 0.52
HDAC1-201ENST00000373548 I3L1I5 382 aaPredicted RBP18.3■□□□□ 0.52
HDAC1-201ENST00000373548 STK25O00506 426 aa18.3■□□□□ 0.52
HDAC1-201ENST00000373548 FRS3O43559 492 aa18.3■□□□□ 0.52
HDAC1-201ENST00000373548 SRPX2O60687 465 aaPredicted RBP18.3■□□□□ 0.52
HDAC1-201ENST00000373548 MRPS14O60783 128 aaKnown RBP18.3■□□□□ 0.52
HDAC1-201ENST00000373548 OSMP13725 252 aa18.3■□□□□ 0.52
HDAC1-201ENST00000373548 PRKAR1BP31321 381 aa18.3■□□□□ 0.52
HDAC1-201ENST00000373548 UGT2B15P54855 530 aa18.3■□□□□ 0.52
HDAC1-201ENST00000373548 TYW3Q6IPR3 259 aaKnown RBP18.3■□□□□ 0.52
HDAC1-201ENST00000373548 OGFOD3Q6PK18 319 aa18.3■□□□□ 0.52
HDAC1-201ENST00000373548 DHRS4L2Q6PKH6 230 aa18.3■□□□□ 0.52
HDAC1-201ENST00000373548 OR52P1PQ8NH57 321 aa18.3■□□□□ 0.52
HDAC1-201ENST00000373548 ZNF675Q8TD23 568 aa18.3■□□□□ 0.52
HDAC1-201ENST00000373548 PRR14Q9BWN1 585 aa18.3■□□□□ 0.52
HDAC1-201ENST00000373548 IMPAD1Q9NX62 359 aa18.3■□□□□ 0.52
HDAC1-201ENST00000373548 TMX2-CTNND1H3BSU7 103 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 CT62P0C5K7 136 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 GABRA4P48169 554 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 GFERP55789 205 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 TEKQ02763 1124 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 PRSS48Q7RTY5 328 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 DCUN1D5Q9BTE7 237 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 PIGUQ9H490 435 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 PSORS1C1Q9UIG5 152 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 WDR45Q9Y484 360 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 HEMK1Q9Y5R4 338 aaPredicted RBP18.29■□□□□ 0.52
HDAC1-201ENST00000373548 FOXS1O43638 330 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 SLITRK5O94991 958 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 POU1F1P28069 291 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 CNR2P34972 360 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 CTSKP43235 329 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 ZP2Q05996 745 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 EXOSC7Q15024 291 aaKnown RBP18.29■□□□□ 0.52
HDAC1-201ENST00000373548 PUS10Q3MIT2 529 aaKnown RBP18.29■□□□□ 0.52
HDAC1-201ENST00000373548 CLIP4Q8N3C7 705 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 MORN4Q8NDC4 146 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 FKBP10Q96AY3 582 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 CTHRC1Q96CG8 243 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 SDF2Q99470 211 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 MTHFD2LQ9H903 347 aaPredicted RBP18.29■□□□□ 0.52
HDAC1-201ENST00000373548 WARS2Q9UGM6 360 aaKnown RBP18.29■□□□□ 0.52
HDAC1-201ENST00000373548 SLC13A4Q9UKG4 626 aa18.29■□□□□ 0.52
HDAC1-201ENST00000373548 K7ESF4 209 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 MAN1A2O60476 641 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 NOL3O60936 208 aaKnown RBP18.28■□□□□ 0.52
HDAC1-201ENST00000373548 SOX14O95416 240 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 FADS2O95864 444 aaKnown RBP18.28■□□□□ 0.52
HDAC1-201ENST00000373548 IGFBP1P08833 259 aaPredicted RBP18.28■□□□□ 0.52
HDAC1-201ENST00000373548 ACVR2AP27037 513 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 CDC42P60953 191 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 LSM11P83369 360 aaKnown RBP eCLIP18.28■□□□□ 0.52
HDAC1-201ENST00000373548 TARDBPQ13148 414 aaKnown RBP eCLIP18.28■□□□□ 0.52
HDAC1-201ENST00000373548 ILKQ13418 452 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 INAVAQ3KP66 663 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 C14orf28Q4W4Y0 310 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 CCNJQ5T5M9 372 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 SLC36A4Q6YBV0 504 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 OR4K5Q8NGD3 323 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 RORBQ92753 470 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 TGM7Q96PF1 710 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 FUNDC2Q9BWH2 189 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 RBCK1Q9BYM8 510 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 AMBNQ9NP70 447 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 HCN3Q9P1Z3 774 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 VCANP13611 3396 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 A0A1W2PPW3 197 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 PIAS2O75928 621 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 IFI6P09912 130 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 ALOX5P09917 674 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 PPM1FP49593 454 aaPredicted RBP18.28■□□□□ 0.52
HDAC1-201ENST00000373548 CCDC81Q6ZN84 652 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 DGAT2L6Q6ZPD8 337 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 SDR16C5Q8N3Y7 309 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 SVOPQ8N4V2 548 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 RAB2BQ8WUD1 216 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 DNASE2BQ8WZ79 361 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 ZNF285Q96NJ3 590 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 COPS4Q9BT78 406 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 POLR2J3Q9H1A7 115 aaKnown RBP18.28■□□□□ 0.52
HDAC1-201ENST00000373548 TRIM45Q9H8W5 580 aaPredicted RBP18.28■□□□□ 0.52
HDAC1-201ENST00000373548 ACOT13Q9NPJ3 140 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 FKBP14Q9NWM8 211 aa18.28■□□□□ 0.52
HDAC1-201ENST00000373548 ZNF443Q9Y2A4 671 aaPredicted RBP18.28■□□□□ 0.52
HDAC1-201ENST00000373548 IGHV5-51A0A0C4DH38 117 aa18.27■□□□□ 0.52
HDAC1-201ENST00000373548 TP53P04637 393 aaPredicted RBP18.27■□□□□ 0.52
HDAC1-201ENST00000373548 DCNP07585 359 aaKnown RBP18.27■□□□□ 0.52
HDAC1-201ENST00000373548 SLC35E2P0CK97 266 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms