RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 MECRQ9BV79 373 aa17.55■□□□□ 0.4
TRAPPC3-204ENST00000373166 OR10A5Q9H207 317 aa17.55■□□□□ 0.4
TRAPPC3-204ENST00000373166 PLEKHF2Q9H8W4 249 aa17.55■□□□□ 0.4
TRAPPC3-204ENST00000373166 TNFRSF12AQ9NP84 129 aa17.55■□□□□ 0.4
TRAPPC3-204ENST00000373166 GIMAP4Q9NUV9 329 aa17.55■□□□□ 0.4
TRAPPC3-204ENST00000373166 SIRT5Q9NXA8 310 aa17.55■□□□□ 0.4
TRAPPC3-204ENST00000373166 FIS1Q9Y3D6 152 aa17.55■□□□□ 0.4
TRAPPC3-204ENST00000373166 C15orf38-AP3S2A0A0A6YYH1 394 aa17.54■□□□□ 0.4
TRAPPC3-204ENST00000373166 C2orf92A0A1B0GVN3 265 aa17.54■□□□□ 0.4
TRAPPC3-204ENST00000373166 FAM171A2A8MVW0 826 aa17.54■□□□□ 0.4
TRAPPC3-204ENST00000373166 NPHS1O60500 1241 aa17.54■□□□□ 0.4
TRAPPC3-204ENST00000373166 GOSR1O95249 250 aa17.54■□□□□ 0.4
TRAPPC3-204ENST00000373166 SF3B4Q15427 424 aaKnown RBP eCLIP17.54■□□□□ 0.43e-7■■■□□ 15.6
TRAPPC3-204ENST00000373166 FAM76AQ8TAV0 307 aa17.54■□□□□ 0.4
TRAPPC3-204ENST00000373166 C11orf24Q96F05 449 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC3-204ENST00000373166 CNRIP1Q96F85 164 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC3-204ENST00000373166 EML4Q9HC35 981 aaKnown RBP17.54■□□□□ 0.4
TRAPPC3-204ENST00000373166 HEY2Q9UBP5 337 aa17.54■□□□□ 0.4
TRAPPC3-204ENST00000373166 LRRC3CA6NJW4 275 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 SLC28A1O00337 649 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 RGS14O43566 566 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 NEFHP12036 1026 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 DCAF7P61962 342 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 DUSP8Q13202 625 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 PRICKLE4Q2TBC4 344 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 KANK2Q63ZY3 851 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 TMEM198Q66K66 360 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 POMZP3Q6PJE2 187 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 PM20D2Q8IYS1 436 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 ZNF615Q8N8J6 731 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 FAM13CQ8NE31 585 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 LINC01560Q8TB33 94 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 TP53INP1Q96A56 240 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 EXOSC8Q96B26 276 aaKnown RBP17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 HSPBAP1Q96EW2 488 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 YIPF4Q9BSR8 244 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 DOHHQ9BU89 302 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 CENPHQ9H3R5 247 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 BEX4Q9NWD9 120 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 MAT2BQ9NZL9 334 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 EHD3Q9NZN3 535 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 BCAP29Q9UHQ4 241 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 CFL2Q9Y281 166 aa17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 POLR3HQ9Y535 204 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC3-204ENST00000373166 HEXAP06865 529 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 FBXO45P0C2W1 286 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 CREB1P16220 341 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 GDF1P27539 372 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 SERPINB5P36952 375 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 WNT3P56703 355 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 NRG3P56975 720 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 NKX6-1P78426 367 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 SORDQ00796 357 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 MAP4K2Q12851 820 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 CEP85LQ5SZL2 805 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 SHEQ5VZ18 495 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 FAM180BQ6P0A1 224 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 LYPD8Q6UX82 237 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 CROCCP2Q86T23 111 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 ZNF441Q8N8Z8 693 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 ADCY4Q8NFM4 1077 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 OR10G3Q8NGC4 313 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 ARSGQ96EG1 525 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 METTL2AQ96IZ6 378 aaKnown RBP17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 ZNF681Q96N22 645 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 TIMP4Q99727 224 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 ZNF395Q9H8N7 513 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 PROK2Q9HC23 129 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 MYNNQ9NPC7 610 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 MIEF1Q9NQG6 463 aa17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 CHCHD2Q9Y6H1 151 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-204ENST00000373166 NSD1Q96L73 2696 aaPredicted RBP17.52■□□□□ 0.39
TRAPPC3-204ENST00000373166 CLCA1A8K7I4 914 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 CAPN14A8MX76 684 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 KDM4EB2RXH2 506 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 CTIFO43310 598 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 TYROBPO43914 113 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 SEC22BO75396 215 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 CHRNGP07510 517 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 DDCP20711 480 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 GPX3P22352 226 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 PRPH2P23942 346 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 TMED10P49755 219 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 ZNF136P52737 540 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 DUSP2Q05923 314 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 CRYZQ08257 329 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 C2orf80Q0P641 193 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 EXOSC7Q15024 291 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 LTB4RQ15722 352 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 ARL13AQ5H913 290 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 NSUN5P2Q63ZY6 315 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 NOXRED1Q6NXP6 359 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 FAM111BQ6SJ93 734 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 RNF165Q6ZSG1 346 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 ZCCHC23Q6ZST2 131 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 IKBIPQ70UQ0 350 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 C17orf47Q8NEP4 570 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 LRTM1Q9HBL6 345 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 SSU72Q9NP77 194 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 SLC35C2Q9NQQ7 365 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms