RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 HHEXQ03014 270 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 PLBD1Q6P4A8 553 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 HMGN2P46Q86SG4 172 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 GALNT10Q86SR1 603 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 CSNK2A3Q8NEV1 391 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 CPT1CQ8TCG5 803 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 PLEKHO2Q8TD55 490 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 TRUB1Q8WWH5 349 aaKnown RBP10.96□□□□□ -0.65
VCL-202ENST00000372755 KCNK12Q9HB15 430 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 OR6C6A6NF89 314 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 TOXO94900 526 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 HTR3BO95264 441 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 CRABP1P29762 137 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 SLC6A8P48029 635 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 TAS2R31P59538 309 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 CFAP77Q6ZQR2 320 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 CMTM1Q8IZ96 169 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 ZNF696Q9H7X3 374 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 FAIMQ9NVQ4 179 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 RIMBP3CA6NJZ7 1639 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 RIMBP3BA6NNM3 1639 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 RIMBP3Q9UFD9 1639 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 FER1L4A9Z1Z3 1794 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 HMX3A6NHT5 357 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 MSL3P1P0C860 447 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 SCAPQ12770 1279 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 SERTAD2Q14140 314 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 ZNF423Q2M1K9 1284 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 SLC35F2Q8IXU6 374 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 L3HYPDHQ96EM0 354 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 HDHD5Q9BXW7 423 aa10.96□□□□□ -0.66
VCL-202ENST00000372755 ABCC6O95255 1503 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 E7ESA3 106 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 SNAI1O95863 264 aaPredicted RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 APOC3P02656 99 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 MMP2P08253 660 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 OSMP13725 252 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 RUNX3Q13761 415 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 FAM198BQ6UWH4 519 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 DTX3Q8N9I9 347 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 OR51T1Q8NGJ9 327 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 SCML1Q9UN30 329 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 CAMTA1Q9Y6Y1 1673 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 PNMTP11086 282 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 SLC2A5P22732 501 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 HMGCLP35914 325 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 PBX2P40425 430 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 EMC10Q5UCC4 262 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 STEAP4Q687X5 459 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 PNCKQ6P2M8 343 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 ZNF704Q6ZNC4 412 aaPredicted RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 TSPYL5Q86VY4 417 aaPredicted RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 HYLS1Q96M11 299 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 BCL7BQ9BQE9 202 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 SOX17Q9H6I2 414 aaPredicted RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 RLIMQ9NVW2 624 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 MRPL15Q9P015 296 aaKnown RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 LRFN1Q9P244 771 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 C2orf78A6NCI8 922 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 SLC1A7O00341 560 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 GOSR2O14653 212 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 NDUFB2O95178 105 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 SPINT3P49223 89 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 DAP3P51398 398 aaKnown RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 ACY1Q03154 408 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 LCN8Q6JVE9 175 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 CCBE1Q6UXH8 406 aaPredicted RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 ANKRD13BQ86YJ7 626 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 OR4N5Q8IXE1 308 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 NRMQ8IXM6 262 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 MALSU1Q96EH3 234 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 MS4A4EQ96PG1 132 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 APMAPQ9HDC9 416 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 ASB4Q9Y574 426 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 SC5DO75845 299 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 PABPC4LP0CB38 370 aaKnown RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 PTH2RP49190 550 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 SIM1P81133 766 aaPredicted RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 SRYQ05066 204 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 SFRP4Q6FHJ7 346 aaPredicted RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 PRSS48Q7RTY5 328 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 TMEM135Q86UB9 458 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 ZNF695Q8IW36 515 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 ZC3H3Q8IXZ2 948 aaKnown RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 GTPBP8Q8N3Z3 284 aaPredicted RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 OR7G2Q8NG99 324 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 OR4K5Q8NGD3 323 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 MRI1Q9BV20 369 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 SLC17A9Q9BYT1 436 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 CWH43Q9H720 699 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 IL23AQ9NPF7 189 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 EDARQ9UNE0 448 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 NFS1Q9Y697 457 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 MDFIC2A0A1B0GVS7 189 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 APLNRP35414 380 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 CDKN2CP42773 168 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 DSC1Q08554 894 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 EIF2B1Q14232 305 aaKnown RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 ABHD17BQ5VST6 288 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 ENPP6Q6UWR7 440 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms