RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 LDB1Q86U70 411 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-203ENST00000372232 SPNS2Q8IVW8 549 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 CFAP52Q8N1V2 620 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 DNAJC22Q8N4W6 341 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 TTC29Q8NA56 475 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-203ENST00000372232 RNASE11Q8TAA1 199 aaKnown RBP8.36□□□□□ -1.07
ATG4A-203ENST00000372232 C2orf15Q8WU43 125 aaKnown RBP8.36□□□□□ -1.07
ATG4A-203ENST00000372232 OTULINQ96BN8 352 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 TSPAN17Q96FV3 270 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 C14orf144Q96I85 54 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 TAPBPLQ9BX59 468 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 PDFQ9HBH1 243 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 CHMP1AQ9HD42 196 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-203ENST00000372232 MARCH4Q9P2E8 410 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-203ENST00000372232 ASH2LQ9UBL3 628 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 KCTD3Q9Y597 815 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 DOCK4Q8N1I0 1966 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 MEIKINA0A087WXM9 373 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 A0A0D9SEW6 157 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 C5orf52A6NGY3 159 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 CLCA1A8K7I4 914 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 C9JVG2 144 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 TGM5O43548 720 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 RAD1O60671 282 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 STX11O75558 287 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 PAK4O96013 591 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-203ENST00000372232 NNMTP40261 264 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 GPR3P46089 330 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 CRISP3P54108 245 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 ACVR1Q04771 509 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 COTL1Q14019 142 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF235Q14590 738 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 TCTN1Q2MV58 587 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 FRMPD2BQ6IN97 320 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 HAGHLQ6PII5 290 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-203ENST00000372232 FAM198BQ6UWH4 519 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 HSDL2Q6YN16 418 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 PHYKPLQ8IUZ5 450 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 FAM126BQ8IXS8 530 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 C11orf65Q8NCR3 313 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 TMIEQ8NEW7 156 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 OR52E4Q8NGH9 312 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 C2CD4CQ8TF44 421 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 SCARB1Q8WTV0 552 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 GGHQ92820 318 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 MAP3K3Q99759 626 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 SSX3Q99909 188 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 SOSTQ9BQB4 213 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 TMEM43Q9BTV4 400 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 NTMT1Q9BV86 223 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 MAGIXQ9H6Y5 334 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 PPP1R3EQ9H7J1 279 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 CRLF2Q9HC73 371 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 DLL4Q9NR61 685 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 RASSF1Q9NS23 344 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 MED11Q9P086 117 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 GHRLQ9UBU3 117 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 LEF1Q9UJU2 399 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-203ENST00000372232 PPIEQ9UNP9 301 aaKnown RBP8.36□□□□□ -1.07
ATG4A-203ENST00000372232 CRYL1Q9Y2S2 319 aa8.36□□□□□ -1.07
ATG4A-203ENST00000372232 A0A1W2PQL4 384 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 OR51F1A6NGY5 319 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 RHPN2P1A8MT19 583 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF670-ZNF695F2Z2N8 137 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 GTPBP1O00178 669 aaKnown RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 ATP6AP2O75787 350 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 OR4F21O95013 312 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 WISP3O95389 354 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 C1RP00736 705 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 FGF1P05230 155 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 HIST1H2AGP0C0S8 130 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 NCF1P14598 390 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 RPS2P15880 293 aaKnown RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 HOXB6P17509 224 aaKnown RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 HLA-DPA1P20036 260 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 HIST1H2ADP20671 130 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 HOXA9P31269 272 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 SLC6A4P31645 630 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 HSPA7P48741 367 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 DAPP51397 102 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 LBX1P52954 281 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 CDKN2DP55273 166 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 MAZP56270 477 aaKnown RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 SNRPEP62304 92 aaKnown RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 DHODHQ02127 395 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 PPP1R8Q12972 351 aaKnown RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 EIF4HQ15056 248 aaKnown RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 RBMS2Q15434 407 aaKnown RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 HIST2H2AA3Q6FI13 130 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 DHRS7BQ6IAN0 325 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 OR4F3Q6IEY1 312 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 LILRA6Q6PI73 481 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 AFTPHQ6ULP2 937 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 C16orf54Q6UWD8 224 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 TMEM207Q6UWW9 146 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 GCNT7Q6ZNI0 430 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 SYT9Q86SS6 491 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 LHFPL3Q86UP9 236 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 CISD2Q8N5K1 135 aaKnown RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 ATP6V1C2Q8NEY4 427 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms