RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ZNF578Q96N58 590 aaPredicted RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 SERINC2Q96SA4 455 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 TREX2Q9BQ50 279 aaPredicted RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 FUNDC2Q9BWH2 189 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 TRIM45Q9H8W5 580 aaPredicted RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 MS4A12Q9NXJ0 267 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 ERVK-18Q9QC07 812 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 TRPC4Q9UBN4 977 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 LIPT1Q9Y234 373 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 RNF6Q9Y252 685 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 SLC9A8Q9Y2E8 581 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 ATG4BQ9Y4P1 393 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 ZNF780BQ9Y6R6 833 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 NINQ8N4C6 2090 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 ARID1BQ8NFD5 2236 aaPredicted RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 TEX51A0A1B0GUA7 166 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 BTN3A3O00478 584 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 PPM1DO15297 605 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 CSO75390 466 aaKnown RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 ERAL1O75616 437 aaKnown RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 C1QL1O75973 258 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 GABARAPO95166 117 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 AGR2O95994 175 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 BCL10O95999 233 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 H1F0P07305 194 aaKnown RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 OR12D1P0DN82 309 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 ACVR2AP27037 513 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 EPHA2P29317 976 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 ST13P50502 369 aaKnown RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 GP2P55259 537 aaKnown RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 CDC42P60953 191 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 GABREP78334 506 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 FZD2Q14332 565 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 NDUFA9Q16795 377 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 PRRT3Q5FWE3 981 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 FAM180BQ6P0A1 224 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 VN1R4Q7Z5H5 301 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 FAM181AQ8N9Y4 354 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 CAMKVQ8NCB2 501 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 OR52J3Q8NH60 311 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 RHOXF1Q8NHV9 184 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 FLVCR1-AS1Q8TAF5 88 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 APH1BQ8WW43 257 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 SGCDQ92629 289 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 RAB8BQ92930 207 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 TSACCQ96A04 125 aaPredicted RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 CNRIP1Q96F85 164 aaPredicted RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 COL21A1Q96P44 957 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 OR2A14Q96R47 310 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 DCUN1D5Q9BTE7 237 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 GSDMCQ9BYG8 508 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 TMEM168Q9H0V1 697 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 PLGRKTQ9HBL7 147 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 NECTIN3Q9NQS3 549 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 IMPAD1Q9NX62 359 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 FBXW2Q9UKT8 454 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 DSPPQ9NZW4 1301 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 LY6G6EA0A0G2JKS1 128 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 KIR2DS5A0A0G2JLQ3 304 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 A0A0G2JNG1 304 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 A0A1W2PPW3 197 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 CPED1A4D0V7 1026 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 SH3D21A4FU49 640 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 J3KTA2 159 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 KIR2DS3K7RE56 304 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 SYT5O00445 386 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 SLC22A1O15245 554 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 SLITRK5O94991 958 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 EML2O95834 649 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 MT-ND2P03891 347 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 CSF2P04141 144 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 GP1BAP07359 652 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 IFI6P09912 130 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 SMIM10L1P0DMW3 83 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 LSSP48449 732 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 HPCAP84074 193 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 TNFRSF17Q02223 184 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 KIR2DS5Q14953 304 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 TBCEQ15813 527 aaPredicted RBP13.19□□□□□ -0.3
LDB3-204ENST00000372066 MANEAQ5SRI9 462 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 DCST1Q5T197 706 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 ZNF770Q6IQ21 691 aaPredicted RBP13.19□□□□□ -0.3
LDB3-204ENST00000372066 RD3Q7Z3Z2 195 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 SZRD1Q7Z422 152 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 SLC44A2Q8IWA5 706 aaPredicted RBP13.19□□□□□ -0.3
LDB3-204ENST00000372066 FAM20CQ8IXL6 584 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 ZNF655Q8N720 491 aaPredicted RBP13.19□□□□□ -0.3
LDB3-204ENST00000372066 AQP11Q8NBQ7 271 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 OR9Q2Q8NGE9 314 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 IFI44Q8TCB0 444 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 GPBAR1Q8TDU6 330 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 XAGE5Q8WWM1 108 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 SMIM10Q96HG1 83 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 NIPSNAP1Q9BPW8 284 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 PINK1Q9BXM7 581 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 DGCR6LQ9BY27 220 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 NAA50Q9GZZ1 169 aaKnown RBP13.19□□□□□ -0.3
LDB3-204ENST00000372066 NMNAT1Q9HAN9 279 aaPredicted RBP13.19□□□□□ -0.3
LDB3-204ENST00000372066 ACOT13Q9NPJ3 140 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 FKBP14Q9NWM8 211 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms