RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SMAD5Q99717 465 aaKnown RBP9.73□□□□□ -0.85
COL5A1-202ENST00000371820 CRB3Q9BUF7 120 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 DUSP21Q9H596 190 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 SLC22A11Q9NSA0 550 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 C14orf105Q9NVL8 296 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 GPRC5BQ9NZH0 403 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 GMPR2Q9P2T1 348 aaKnown RBP9.73□□□□□ -0.85
COL5A1-202ENST00000371820 ERGIC3Q9Y282 383 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 WBP11Q9Y2W2 641 aaKnown RBP9.73□□□□□ -0.85
COL5A1-202ENST00000371820 A3GALT2U3KPV4 340 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 IGKV1-8A0A0C4DH67 115 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 A6NL46 340 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 TTLL8A6PVC2 850 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 H7BY64 318 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 CLIC1O00299 241 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 SLC1A7O00341 560 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 CNOT3O75175 753 aaKnown RBP9.72□□□□□ -0.85
COL5A1-202ENST00000371820 ANGPTL1O95841 491 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 PDYNP01213 254 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 FABP3P05413 133 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 UMODP07911 640 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 IGFBP5P24593 272 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 CXCR2P25025 360 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 KDELR2P33947 212 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 AVPR1BP47901 424 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 SLC6A12P48065 614 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 PSMD7P51665 324 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 SOX8P57073 446 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 SKP1P63208 163 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 IL5RAQ01344 420 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 FADDQ13158 208 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 NAE1Q13564 534 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 DSG2Q14126 1118 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 VMACQ2NL98 169 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 NOXRED1Q6NXP6 359 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 CBLL1Q75N03 491 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 DEPDC4Q8N2C3 294 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 GALNT16Q8N428 558 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 METTL27Q8N6F8 245 aaPredicted RBP9.72□□□□□ -0.85
COL5A1-202ENST00000371820 OR7A2PQ8NGA2 310 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 CPT1CQ8TCG5 803 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 STT3BQ8TCJ2 826 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 MYDGFQ969H8 173 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 ITFG2Q969R8 447 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 C10orf90Q96M02 699 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 PRAP1Q96NZ9 151 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 EPYCQ99645 322 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 NUDT9Q9BW91 350 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 SGPP1Q9BX95 441 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 PIF1Q9H611 641 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 SOX17Q9H6I2 414 aaPredicted RBP9.72□□□□□ -0.85
COL5A1-202ENST00000371820 REEP1Q9H902 201 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 MKKSQ9NPJ1 570 aaPredicted RBP9.72□□□□□ -0.85
COL5A1-202ENST00000371820 PLCXD1Q9NUJ7 323 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 ATAD3AQ9NVI7 634 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 CUEDC1Q9NWM3 386 aaPredicted RBP9.72□□□□□ -0.85
COL5A1-202ENST00000371820 SIRT5Q9NXA8 310 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 VPS29Q9UBQ0 182 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 CTSFQ9UBX1 484 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 ENPP5Q9UJA9 477 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 VPS4AQ9UN37 437 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 GMPPBQ9Y5P6 360 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 MAU2Q9Y6X3 613 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 NUP210LQ5VU65 1888 aa9.72□□□□□ -0.85
COL5A1-202ENST00000371820 RP1L1Q8IWN7 2480 aaPredicted RBP9.72□□□□□ -0.85
COL5A1-202ENST00000371820 MED13Q9UHV7 2174 aa9.71□□□□□ -0.85
COL5A1-202ENST00000371820 SHANK1Q9Y566 2161 aa9.71□□□□□ -0.85
COL5A1-202ENST00000371820 ICE1Q9Y2F5 2266 aa9.71□□□□□ -0.85
COL5A1-202ENST00000371820 IGLV3-12A0A075B6K2 115 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 KCNE1BA0A087WTH5 132 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 A0A1W2PPW3 197 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 ISPDA4D126 451 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 CLDN24A6NM45 220 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 C9JVG2 144 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 H0YIG0 161 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 H0YIV9 168 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 HAT1O14929 419 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 RGS10O43665 173 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 MPZL2O60487 215 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 CYC1P08574 325 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 ZGLP1P0C6A0 271 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 SLC35G6P0C7Q6 338 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 ANXA8P13928 327 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 PORP16435 677 aaPredicted RBP9.71□□□□□ -0.86
COL5A1-202ENST00000371820 MATN1P21941 496 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 GNLYP22749 145 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 ITGA3P26006 1051 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 UGT2B10P36537 528 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 HPCAL1P37235 193 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 STT3AP46977 705 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 ALDH9A1P49189 494 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 CCR8P51685 355 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 BMXP51813 675 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 PLA2G16P53816 162 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 YBX1P67809 324 aaKnown RBP9.71□□□□□ -0.86
COL5A1-202ENST00000371820 CSNK1G2P78368 415 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 OLR1P78380 273 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 IRF8Q02556 426 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 CD47Q08722 323 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 LAPTM5Q13571 262 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms