RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SLC35F3Q8IY50 421 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 CAMKVQ8NCB2 501 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 PIGMQ9H3S5 423 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 NIPAL2Q9H841 368 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ERVMER34-1Q9H9K5 563 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ZFP37Q9Y6Q3 630 aaPredicted RBP14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ACTL6BO94805 426 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 EPHA1P21709 976 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 MRPS6P82932 125 aaKnown RBP14.56□□□□□ -0.08
COL5A1-201ENST00000371817 SCAPQ12770 1279 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 PDGFRLQ15198 375 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 FEVQ99581 238 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ARVCFO00192 962 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 WNT9AO14904 365 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 NTSR2O95665 410 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ETV3P41162 512 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ENPP6Q6UWR7 440 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 UNQ6126/PRO20091Q6UXV3 157 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 GPR142Q7Z601 462 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 TMPRSS5Q9H3S3 457 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ZDHHC3Q9NYG2 299 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ERVW-1Q9UQF0 538 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 JRKO75564 520 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ETV6P41212 452 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 NPBWR1P48145 328 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 MRPL49Q13405 166 aaKnown RBP14.56□□□□□ -0.08
COL5A1-201ENST00000371817 DUSP7Q16829 419 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 CNKSR3Q6P9H4 555 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 APOOLQ6UXV4 268 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 C1orf87Q8N0U7 546 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 OR4M1Q8NGD0 313 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ZNF382Q96SR6 550 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 C17orf62Q9BQA9 187 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 DNMT3AQ9Y6K1 912 aaPredicted RBP14.56□□□□□ -0.08
COL5A1-201ENST00000371817 LOC102723532A0A0G2JNH3 316 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 MEGF11A6BM72 1044 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 OR51F1A6NGY5 319 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 FGF19O95750 216 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 FGF3P11487 239 aaPredicted RBP14.56□□□□□ -0.08
COL5A1-201ENST00000371817 NKX3-2P78367 333 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 PLAG1Q6DJT9 500 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 SMIM3Q9BZL3 60 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 GGT1P19440 569 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 MSX1P28360 303 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 GIPRP48546 466 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 C4orf17Q53FE4 359 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 ERN2Q76MJ5 926 aaKnown RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 STEAP2Q8NFT2 490 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 DBF4BQ8NFT6 615 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 KCNIP1Q9NZI2 227 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 SALL3Q9BXA9 1300 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 CLTCQ00610 1675 aaKnown RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 GBAP04062 536 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 POLR2CP19387 275 aaPredicted RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 SHMT1P34896 483 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 PDZK1IP1Q13113 114 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 ZMAT1Q5H9K5 638 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 PIWIL3Q7Z3Z3 882 aaKnown RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 BBS10Q8TAM1 723 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 BRIX1Q8TDN6 353 aaKnown RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 DENND1AQ8TEH3 1009 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 ERVK-16P61578 105 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 SIRPB2Q5JXA9 342 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 DNAJC5GQ8N7S2 189 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 WDR18Q9BV38 432 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 B3GNT2Q9NY97 397 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 KLRK1P26718 216 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 RBMS2Q15434 407 aaKnown RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 IL17RDQ8NFM7 739 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 SLC39A13Q96H72 371 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 SGCZQ96LD1 299 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 HSD17B14Q9BPX1 270 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 CENPOQ9BU64 300 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 HINT2Q9BX68 163 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 GAREM1Q9H706 876 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 MAGI3Q5TCQ9 1506 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 C11orf98E9PRG8 122 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 ALX3O95076 343 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 CPT2P23786 658 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 GRM5P41594 1212 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 RPS13P62277 151 aaKnown RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 KIAA0141Q14154 515 aaPredicted RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 FAM124AQ86V42 546 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 SLC35B2Q8TB61 432 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 MSI2Q96DH6 328 aaKnown RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 RNF11Q9Y3C5 154 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 C2orf78A6NCI8 922 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 PRICKLE3O43900 615 aaPredicted RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 UNGP13051 313 aaPredicted RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 CBLP22681 906 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 NFYBP25208 207 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 RANP62826 216 aaKnown RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 LRRC32Q14392 662 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 COL13A1Q5TAT6 717 aaPredicted RBP14.55□□□□□ -0.08
COL5A1-201ENST00000371817 OR51Q1Q8NH59 317 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 FAM122AQ96E09 287 aa14.55□□□□□ -0.08
COL5A1-201ENST00000371817 IL33O95760 270 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 SERPINE2P07093 398 aa14.54□□□□□ -0.08
COL5A1-201ENST00000371817 GPR143P51810 404 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms