RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 UGT2B7P16662 529 aa11.03□□□□□ -0.64
PDE6C-201ENST00000371447 TRHRP34981 398 aaPredicted RBP11.03□□□□□ -0.64
PDE6C-201ENST00000371447 GSTM5P46439 218 aa11.03□□□□□ -0.64
PDE6C-201ENST00000371447 HSDL2Q6YN16 418 aa11.03□□□□□ -0.64
PDE6C-201ENST00000371447 PRICKLE2Q7Z3G6 844 aa11.03□□□□□ -0.64
PDE6C-201ENST00000371447 FAM3CQ92520 227 aa11.03□□□□□ -0.64
PDE6C-201ENST00000371447 TTTY10Q9BZA0 68 aa11.03□□□□□ -0.64
PDE6C-201ENST00000371447 EHD3Q9NZN3 535 aa11.03□□□□□ -0.64
PDE6C-201ENST00000371447 ERGIC3Q9Y282 383 aa11.03□□□□□ -0.64
PDE6C-201ENST00000371447 DNMT3AQ9Y6K1 912 aaPredicted RBP11.03□□□□□ -0.64
PDE6C-201ENST00000371447 AP1M2Q9Y6Q5 423 aa11.03□□□□□ -0.64
PDE6C-201ENST00000371447 CTDSP2O14595 271 aa11.02□□□□□ -0.64
PDE6C-201ENST00000371447 SFSWAPQ12872 951 aaKnown RBP11.02□□□□□ -0.64
PDE6C-201ENST00000371447 ZNF846Q147U1 533 aa11.02□□□□□ -0.64
PDE6C-201ENST00000371447 UBE2J2Q8N2K1 259 aa11.02□□□□□ -0.64
PDE6C-201ENST00000371447 TTLQ8NG68 377 aa11.02□□□□□ -0.64
PDE6C-201ENST00000371447 DYNC2LI1Q8TCX1 351 aa11.02□□□□□ -0.64
PDE6C-201ENST00000371447 GPR151Q8TDV0 419 aa11.02□□□□□ -0.64
PDE6C-201ENST00000371447 GRHL3Q8TE85 626 aa11.02□□□□□ -0.64
PDE6C-201ENST00000371447 ZFPM2Q8WW38 1151 aa11.02□□□□□ -0.64
PDE6C-201ENST00000371447 RERGQ96A58 199 aaPredicted RBP11.02□□□□□ -0.64
PDE6C-201ENST00000371447 SLC35A4Q96G79 324 aa11.02□□□□□ -0.64
PDE6C-201ENST00000371447 ACSS1Q9NUB1 689 aaPredicted RBP11.02□□□□□ -0.64
PDE6C-201ENST00000371447 C14orf119Q9NWQ9 140 aa11.02□□□□□ -0.64
PDE6C-201ENST00000371447 FTSJ1Q9UET6 329 aa11.02□□□□□ -0.64
PDE6C-201ENST00000371447 KLF15Q9UIH9 416 aa11.02□□□□□ -0.64
PDE6C-201ENST00000371447 RPLP0P05388 317 aaKnown RBP11.02□□□□□ -0.65
PDE6C-201ENST00000371447 PRG2P13727 222 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 LSSP48449 732 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 NFATC4Q14934 902 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 TMEM35AQ53FP2 167 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 USP30Q70CQ3 517 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 CYP4Z2PQ8N1L4 340 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 C7orf57Q8NEG2 295 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 OR9Q1Q8NGQ5 310 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 OR52P1PQ8NH57 321 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 SMAP2Q8WU79 429 aaPredicted RBP11.02□□□□□ -0.65
PDE6C-201ENST00000371447 GATAD2BQ8WXI9 593 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 SEMA4GQ9NTN9 838 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 ACTR10Q9NZ32 417 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 A0A087WUU8 490 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 ZAR1LA6NP61 321 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 H0YGG7 62 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 ARHGAP33O14559 1287 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 GUCY1B2O75343 617 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 SLC2A10O95528 541 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 DLGAP3O95886 979 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 HNRNPA2B1P22626 353 aaKnown RBP11.02□□□□□ -0.65
PDE6C-201ENST00000371447 ARF3P61204 181 aaPredicted RBP11.02□□□□□ -0.65
PDE6C-201ENST00000371447 NRMQ8IXM6 262 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 TMEM52Q8NDY8 209 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 FAM83FQ8NEG4 500 aaPredicted RBP11.02□□□□□ -0.65
PDE6C-201ENST00000371447 DENND6BQ8NEG7 585 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 TMEM255BQ8WV15 326 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 TRUB1Q8WWH5 349 aaKnown RBP11.02□□□□□ -0.65
PDE6C-201ENST00000371447 CEP19Q96LK0 163 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 RIPOR3Q96MK2 946 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 RAB11FIP5Q9BXF6 653 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 NUAK2Q9H093 628 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 KIR3DX1Q9H7L2 352 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 MAT2BQ9NZL9 334 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 REV1Q9UBZ9 1251 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 WDR45Q9Y484 360 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 CSNK1G3Q9Y6M4 447 aa11.02□□□□□ -0.65
PDE6C-201ENST00000371447 ZC3H12DA2A288 527 aaKnown RBP11.01□□□□□ -0.65
PDE6C-201ENST00000371447 STK25O00506 426 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 PEX12O00623 359 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 MYL12BO14950 172 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 EMC8O43402 210 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 SDC3O75056 442 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 GNSP15586 552 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 EIF2DP41214 584 aaKnown RBP11.01□□□□□ -0.65
PDE6C-201ENST00000371447 MAT1AQ00266 395 aaKnown RBP11.01□□□□□ -0.65
PDE6C-201ENST00000371447 ZNF91Q05481 1191 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 ZNF404Q494X3 552 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 ZNF770Q6IQ21 691 aaPredicted RBP11.01□□□□□ -0.65
PDE6C-201ENST00000371447 BHLHB9Q6PI77 547 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 SLC22A16Q86VW1 577 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 NRROSQ86YC3 692 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 RSC1A1Q92681 617 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 TOE1Q96GM8 510 aaKnown RBP11.01□□□□□ -0.65
PDE6C-201ENST00000371447 CNDP2Q96KP4 475 aaKnown RBP11.01□□□□□ -0.65
PDE6C-201ENST00000371447 MCHR1Q99705 422 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 CACYBPQ9HB71 228 aaKnown RBP11.01□□□□□ -0.65
PDE6C-201ENST00000371447 HCN3Q9P1Z3 774 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 COL4A3Q01955 1670 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 FAAHO00519 579 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 AP3D1O14617 1153 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 RDH16O75452 317 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 S100A5P33763 92 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 CAV3P56539 151 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 DUSP5Q16690 384 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 PLAG1Q6DJT9 500 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 Q6ZNX1 250 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 GATAD2AQ86YP4 633 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 POC5Q8NA72 575 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 OR4K14Q8NGD5 310 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 SLIRPQ9GZT3 109 aaKnown RBP11.01□□□□□ -0.65
PDE6C-201ENST00000371447 SLC38A1Q9H2H9 487 aa11.01□□□□□ -0.65
PDE6C-201ENST00000371447 NECTIN3Q9NQS3 549 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms