RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 TMBIM1Q969X1 311 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 ZNF597Q96LX8 424 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 PPP3R2Q96LZ3 170 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 TSSK3Q96PN8 268 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 TP63Q9H3D4 680 aaPredicted RBP18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 ZNF395Q9H8N7 513 aaPredicted RBP18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 TAS2R9Q9NYW1 312 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 SPRR3Q9UBC9 169 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 GIMAP2Q9UG22 337 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 HAO1Q9UJM8 370 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 ARHGAP21Q5T5U3 1957 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 NPIPA2E9PIF3 369 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 NPIPA3F8WFD2 350 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 BCKDKO14874 412 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 LYPLA1O75608 230 aaPredicted RBP18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 HPNP05981 417 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 NTSP30990 170 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 RPP38P78345 283 aaKnown RBP18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 TMEM198Q66K66 360 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 TIGD3Q6B0B8 471 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 TMEM107Q6UX40 140 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 ZNF551Q7Z340 670 aaPredicted RBP18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 RPRMLQ8N4K4 120 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 AGR3Q8TD06 166 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 GFM2Q969S9 779 aaKnown RBP18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 MTERF3Q96E29 417 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 SORT1Q99523 831 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 PNPLA3Q9NST1 481 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 ATP6V1HQ9UI12 483 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 C15orf41Q9Y2V0 281 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 PCNX3Q9H6A9 2034 aa18.78■□□□□ 0.6
SMNDC1-201ENST00000369592 ADGRG4Q8IZF6 3080 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 TRGV5A0A0B4J1U4 118 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 TMEM114B3SHH9 223 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 ICOSLGO75144 302 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 COQ9O75208 318 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 ZWINTO95229 277 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 GRNP28799 593 aaKnown RBP18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 PTPN6P29350 595 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 ASMTP46597 345 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 MAN2A2P49641 1150 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 CDK9P50750 372 aaKnown RBP18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 SMSP52788 366 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 ZNF630Q2M218 657 aaPredicted RBP18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 GALNTL6Q49A17 601 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 RTL6Q6ICC9 239 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 ANKRD26P1Q6NSI1 321 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 SLC30A6Q6NXT4 461 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 PACS2Q86VP3 889 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 EID3Q8N140 333 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 OR4N2Q8NGD1 307 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 NEIL3Q8TAT5 605 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 CIDECQ96AQ7 238 aaPredicted RBP18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 COL21A1Q96P44 957 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 GNRHR2Q96P88 292 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 LMF2Q9BU23 707 aaKnown RBP18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 ACSS1Q9NUB1 689 aaPredicted RBP18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 PCDHGB3Q9Y5G1 929 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 FAM215AQ9Y5M1 114 aa18.77■□□□□ 0.6
SMNDC1-201ENST00000369592 SNPHO15079 494 aa18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 AKAP10O43572 662 aa18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 POU3F2P20265 443 aaPredicted RBP18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 PNLIPRP2P54317 469 aa18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 GAS1P54826 345 aa18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 ABCE1P61221 599 aaKnown RBP18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 CHI3L2Q15782 390 aa18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 EXOSC6Q5RKV6 272 aaKnown RBP18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 WDSUB1Q8N9V3 476 aa18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 ACBD4Q8NC06 268 aa18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 CLHC1Q8NHS4 586 aa18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 PPCDCQ96CD2 204 aa18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 SLC6A15Q9H2J7 730 aa18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 TNFRSF10DQ9UBN6 386 aa18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 B4GALT7Q9UBV7 327 aa18.76■□□□□ 0.59
SMNDC1-201ENST00000369592 LRBAP50851 2863 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 WDR91A4D1P6 747 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 PRAMEF25A6NGN4 478 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 B4DXG7 233 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 PDPK1O15530 556 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 PEX11AO75192 247 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 SNUPNO95149 360 aaKnown RBP18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 GRK2P25098 689 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 ELAVL4P26378 380 aaKnown RBP18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 SLC18A1P54219 525 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 WDR4P57081 412 aaKnown RBP18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 MLC1Q15049 377 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 CYP27C1Q4G0S4 372 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 SP5Q6BEB4 398 aaPredicted RBP18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 SLC44A2Q8IWA5 706 aaPredicted RBP18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 RIMKLAQ8IXN7 391 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 ZNF781Q8N8C0 355 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 SARAFQ96BY9 339 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 ZBTB9Q96C00 473 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 GIMAP5Q96F15 307 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 JSRP1Q96MG2 331 aaPredicted RBP18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 ADOQ96SZ5 270 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 OSBPL11Q9BXB4 747 aa18.75■□□□□ 0.59
SMNDC1-201ENST00000369592 METTL7AQ9H8H3 244 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms