RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TM9SF2Q99805 663 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 G6PC3Q9BUM1 346 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 SFXN3Q9BWM7 321 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 PLEKHF2Q9H8W4 249 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 DLL4Q9NR61 685 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 TAS2R10Q9NYW0 307 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 DLGAP4Q9Y2H0 992 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 MAP1AP78559 2803 aaPredicted RBP14.55□□□□□ -0.08
CKS1B-202ENST00000368436 ACANP16112 2415 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 A0A087WUV0 522 aaPredicted RBP14.54□□□□□ -0.08
CKS1B-202ENST00000368436 H0Y3Z8 333 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 REM1O75628 298 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 SUPT7LO94864 414 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 ATE1O95260 518 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 ESRRBO95718 433 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 RAF1P04049 648 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 IL3P08700 152 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 LHX2P50458 406 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 ADAM8P78325 824 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 PSPHP78330 225 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 WHAMMP3Q1A5X7 153 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 TIFABQ6ZNK6 161 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 IFNEQ86WN2 208 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 SAMD14Q8IZD0 417 aaPredicted RBP14.54□□□□□ -0.08
CKS1B-202ENST00000368436 GBP7Q8N8V2 638 aaPredicted RBP14.54□□□□□ -0.08
CKS1B-202ENST00000368436 NOA1Q8NC60 698 aaKnown RBP14.54□□□□□ -0.08
CKS1B-202ENST00000368436 RDH11Q8TC12 318 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 IFT81Q8WYA0 676 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 C11orf24Q96F05 449 aaPredicted RBP14.54□□□□□ -0.08
CKS1B-202ENST00000368436 VSTM2LQ96N03 204 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 DACH2Q96NX9 599 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 ZNF382Q96SR6 550 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 ADOQ96SZ5 270 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 ANKRA2Q9H9E1 313 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 TMEM216Q9P0N5 145 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 CLCF1Q9UBD9 225 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 FBXL2Q9UKC9 423 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 WIF1Q9Y5W5 379 aa14.54□□□□□ -0.08
CKS1B-202ENST00000368436 CLCA1A8K7I4 914 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 PCDH7O60245 1069 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 DLX3O60479 287 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 ULK1O75385 1050 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 URI1O94763 535 aaPredicted RBP14.53□□□□□ -0.08
CKS1B-202ENST00000368436 CTAGE8P0CG41 777 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 FOSL1P15407 271 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 HOXB4P17483 251 aaPredicted RBP14.53□□□□□ -0.08
CKS1B-202ENST00000368436 TAC1P20366 129 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 IMPDH1P20839 514 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 CHMP24386 653 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 GCAP28676 217 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 STARP49675 285 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 PNLIPRP2P54317 469 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 GAS1P54826 345 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 CLDN18P56856 261 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 CORO7P57737 925 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 EEF1A1P68104 462 aaKnown RBP14.53□□□□□ -0.08
CKS1B-202ENST00000368436 SRYQ05066 204 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 GAB1Q13480 694 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 EFR3AQ14156 821 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 DEFB113Q30KQ7 82 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 TEX35Q5T0J7 233 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 LGSNQ5TDP6 509 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 EEF1A1P5Q5VTE0 462 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 AAGABQ6PD74 315 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 SCIMPQ6UWF3 145 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 GPRIN3Q6ZVF9 776 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 LCA5Q86VQ0 697 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 CTAGE4Q8IX94 777 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 OR9A2Q8NGT5 310 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 UHMK1Q8TAS1 419 aaKnown RBP14.53□□□□□ -0.08
CKS1B-202ENST00000368436 METTL6Q8TCB7 284 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 KAT2AQ92830 837 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 DTNBP1Q96EV8 351 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 TMEM237Q96Q45 408 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 RBM24Q9BX46 236 aaKnown RBP14.53□□□□□ -0.08
CKS1B-202ENST00000368436 ACPTQ9BZG2 426 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 ACBD3Q9H3P7 528 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 GALNT8Q9NY28 637 aa14.53□□□□□ -0.08
CKS1B-202ENST00000368436 RPH3AQ9Y2J0 694 aaPredicted RBP14.53□□□□□ -0.08
CKS1B-202ENST00000368436 B4DXG7 233 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 PLOD2O00469 737 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 HCRTR2O43614 444 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 ZIC3O60481 467 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 PLOD3O60568 738 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 NME6O75414 186 aaPredicted RBP14.52□□□□□ -0.09
CKS1B-202ENST00000368436 HRGP04196 525 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 ZNF708P17019 499 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 HEPACAMQ14CZ8 416 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 BCL2A1Q16548 175 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 SPIN4Q56A73 249 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 FBXW10Q5XX13 1052 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 GALNT18Q6P9A2 607 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 PLXDC2Q6UX71 529 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 NPSR1Q6W5P4 371 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 C16orf78Q8WTQ4 265 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 EXOSC8Q96B26 276 aaKnown RBP14.52□□□□□ -0.09
CKS1B-202ENST00000368436 INTS12Q96CB8 462 aaKnown RBP14.52□□□□□ -0.09
CKS1B-202ENST00000368436 MTBPQ96DY7 904 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 APIPQ96GX9 242 aa14.52□□□□□ -0.09
CKS1B-202ENST00000368436 YIPF4Q9BSR8 244 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms