RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 PIN1Q13526 163 aaPredicted RBP13.13□□□□□ -0.31
USF1-202ENST00000368020 LARS2Q15031 903 aaKnown RBP13.13□□□□□ -0.31
USF1-202ENST00000368020 TRAM2Q15035 370 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 OCLNQ16625 522 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 RNLSQ5VYX0 342 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 FCRL6Q6DN72 434 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 PODNL1Q6PEZ8 512 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 KLHL35Q6PF15 583 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 USP43Q70EL4 1123 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 PEX5LQ8IYB4 626 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 CADM4Q8NFZ8 388 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 OR13H1Q8NG92 308 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 OR4K5Q8NGD3 323 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 OR4D11Q8NGI4 311 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 OR6T1Q8NGN1 323 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 DYNC2LI1Q8TCX1 351 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 ZHX1-C8orf76Q96EF9 292 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 GIMAP5Q96F15 307 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 PLEKHA8Q96JA3 519 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 TPSD1Q9BZJ3 242 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 MTHFD2LQ9H903 347 aaPredicted RBP13.13□□□□□ -0.31
USF1-202ENST00000368020 FBXO8Q9NRD0 319 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 GPR27Q9NS67 375 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 TBCCD1Q9NVR7 557 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.13□□□□□ -0.31
USF1-202ENST00000368020 A3GALT2U3KPV4 340 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 KNL1Q8NG31 2342 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 SPTY2D1-AS1A0A0U1RR47 76 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 AP3D1O14617 1153 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 LAMTOR5O43504 91 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 AIREO43918 545 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 ATP1B1P05026 303 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 ADORA3P0DMS8 318 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 TDGF1P13385 188 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 CPMP14384 443 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 C21orf33P30042 268 aaPredicted RBP13.13□□□□□ -0.31
USF1-202ENST00000368020 SMSP52788 366 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 DUSP2Q05923 314 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 INAVAQ3KP66 663 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 ARHGAP11BQ3KRB8 267 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 DEFB134Q4QY38 66 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 ARMC6Q6NXE6 501 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 SLC46A3Q7Z3Q1 461 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 LACC1Q8IV20 430 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 C1orf210Q8IVY1 113 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 ABCA7Q8IZY2 2146 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 KLHL6Q8WZ60 621 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 SPACA7Q96KW9 195 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 YIPF4Q9BSR8 244 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 POLDIP3Q9BY77 421 aaKnown RBP13.13□□□□□ -0.31
USF1-202ENST00000368020 OCEL1Q9H607 264 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 SLC25A19Q9HC21 320 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 EQTNQ9NQ60 294 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 ETAA1Q9NY74 926 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 SATB2Q9UPW6 733 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 MUC3AQ02505 3323 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 BLACEA4D250 179 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 WASHC1A8K0Z3 465 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 MAN1A2O60476 641 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 IGHV4-34P06331 123 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 THBS1P07996 1170 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 STSP08842 583 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 CCNYL3P0C7X3 344 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 ALPPL2P10696 532 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 CTSEP14091 401 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 NUDT6P53370 316 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 RHAGQ02094 409 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 NCF4Q15080 339 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 TMEM44Q2T9K0 475 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 ZNF750Q32MQ0 723 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 SLC36A4Q6YBV0 504 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 RRM2BQ7LG56 351 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 TRIM73Q86UV7 250 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 RBM45Q8IUH3 476 aaKnown RBP13.12□□□□□ -0.31
USF1-202ENST00000368020 FAM26EQ8N5C1 309 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 AMER2Q8N7J2 671 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 MORN4Q8NDC4 146 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 ZCCHC10Q8TBK6 192 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 GNPDA2Q8TDQ7 276 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 RLN3Q8WXF3 142 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 C16orf58Q96GQ5 468 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 SH3YL1Q96HL8 342 aaPredicted RBP13.12□□□□□ -0.31
USF1-202ENST00000368020 STACQ99469 402 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 GPR174Q9BXC1 333 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 ARMC7Q9H6L4 198 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 SYNPO2LQ9H987 977 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 C11orf16Q9NQ32 467 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 MAN2C1Q9NTJ4 1040 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 HRASLS2Q9NWW9 162 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 FBXO4Q9UKT5 387 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 MKLN1Q9UL63 735 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 C19orf53Q9UNZ5 99 aaPredicted RBP13.12□□□□□ -0.31
USF1-202ENST00000368020 EML5Q05BV3 1969 aa13.12□□□□□ -0.31
USF1-202ENST00000368020 SCN3AQ9NY46 2000 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 TRBV23OR9-2A0A075B6M9 112 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 H0YGG7 62 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 P2RX6O15547 441 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 PLOD3O60568 738 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 CYP7B1O75881 506 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 NADKO95544 446 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms