RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 PRR31Q5SQ13 230 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 RAET1LQ5VY80 246 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 ZCCHC7Q8N3Z6 543 aaKnown RBP13.06□□□□□ -0.32
VAMP4-202ENST00000367740 METTL25Q8N6Q8 603 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 STEAP2Q8NFT2 490 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 SEMA6DQ8NFY4 1073 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 GMPPAQ96IJ6 420 aaPredicted RBP13.06□□□□□ -0.32
VAMP4-202ENST00000367740 PRR14Q9BWN1 585 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 OR51B5Q9H339 312 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 DNAJC11Q9NVH1 559 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 ZNF337Q9Y3M9 751 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 EPN1Q9Y6I3 576 aaPredicted RBP13.06□□□□□ -0.32
VAMP4-202ENST00000367740 CMYA5Q8N3K9 4069 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 NBEAL2Q6ZNJ1 2754 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 NCF1BA6NI72 391 aaPredicted RBP13.05□□□□□ -0.32
VAMP4-202ENST00000367740 NCF1CA8MVU1 366 aaPredicted RBP13.05□□□□□ -0.32
VAMP4-202ENST00000367740 PLPP1O14494 284 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 TAPBPO15533 448 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 NCF1P14598 390 aaPredicted RBP13.05□□□□□ -0.32
VAMP4-202ENST00000367740 EPORP19235 508 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 GRK2P25098 689 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 VPS41P49754 854 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 CDH11P55287 796 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 CTBP2P56545 445 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 DSCR4P56555 118 aaPredicted RBP13.05□□□□□ -0.32
VAMP4-202ENST00000367740 CRYMQ14894 314 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 TSNQ15631 228 aaKnown RBP13.05□□□□□ -0.32
VAMP4-202ENST00000367740 TRIP13Q15645 432 aaPredicted RBP13.05□□□□□ -0.32
VAMP4-202ENST00000367740 AGAP6Q5VW22 663 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 MRM1Q6IN84 353 aaKnown RBP13.05□□□□□ -0.32
VAMP4-202ENST00000367740 FIGNL1Q6PIW4 674 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 FRA10AC1Q70Z53 315 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 CNTN4Q8IWV2 1026 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 RNF175Q8N4F7 328 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 GBP7Q8N8V2 638 aaPredicted RBP13.05□□□□□ -0.32
VAMP4-202ENST00000367740 OR7G1Q8NGA0 311 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 ZFAND2BQ8WV99 257 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 SIGLEC10Q96LC7 697 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 ZNF717Q9BY31 904 aaPredicted RBP13.05□□□□□ -0.32
VAMP4-202ENST00000367740 STMN4Q9H169 189 aaPredicted RBP13.05□□□□□ -0.32
VAMP4-202ENST00000367740 XAB2Q9HCS7 855 aaKnown RBP13.05□□□□□ -0.32
VAMP4-202ENST00000367740 NGBQ9NPG2 151 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 ASB4Q9Y574 426 aa13.05□□□□□ -0.32
VAMP4-202ENST00000367740 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.04□□□□□ -0.32
VAMP4-202ENST00000367740 H3BML4 177 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 ACOX3O15254 700 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 TMPRSS11DO60235 418 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 GCM2O75603 506 aaPredicted RBP13.04□□□□□ -0.32
VAMP4-202ENST00000367740 PLGP00747 810 aaPredicted RBP13.04□□□□□ -0.32
VAMP4-202ENST00000367740 PCNAP12004 261 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 GAS1P54826 345 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 ACTG1P63261 375 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 IRF9Q00978 393 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 LAPTM5Q13571 262 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 E2F2Q14209 437 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 GGTLC2Q14390 218 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 PAGE2BQ5JRK9 111 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 DEPDC1Q5TB30 811 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 HIST2H2BDQ6DRA6 164 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 FAM45BPQ6NSW5 357 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 ADAMTSL2Q86TH1 951 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 SNX31Q8N9S9 440 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 OR5M1Q8NGP8 315 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 PIWIL2Q8TC59 973 aaKnown RBP13.04□□□□□ -0.32
VAMP4-202ENST00000367740 FAM45AQ8TCE6 357 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 RNF138Q8WVD3 245 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 GFM2Q969S9 779 aaKnown RBP13.04□□□□□ -0.32
VAMP4-202ENST00000367740 ESAMQ96AP7 390 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 CMTM7Q96FZ5 175 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 FOLH1BQ9HBA9 442 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 VWA7Q9Y334 891 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 SNX8Q9Y5X2 465 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 CAPN6Q9Y6Q1 641 aa13.04□□□□□ -0.32
VAMP4-202ENST00000367740 A0A0A6YYD5 115 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 OR6C70A6NIJ9 312 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 VWC2LB2RUY7 222 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 EEDO75530 441 aaKnown RBP13.03□□□□□ -0.32
VAMP4-202ENST00000367740 CSF3P09919 207 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 GGT5P36269 586 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 HSPA7P48741 367 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 RAP1GDS1P52306 607 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 RPS3AP61247 264 aaKnown RBP13.03□□□□□ -0.32
VAMP4-202ENST00000367740 CHIT1Q13231 466 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 ZNF460Q14592 562 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 RAB35Q15286 201 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 PDK4Q16654 411 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 HIST2H2ACQ16777 129 aaPredicted RBP13.03□□□□□ -0.32
VAMP4-202ENST00000367740 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.03□□□□□ -0.32
VAMP4-202ENST00000367740 HIST2H2AA3Q6FI13 130 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 PPP4R4Q6NUP7 873 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 GALNT7Q86SF2 657 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 STK32CQ86UX6 486 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 LAS2Q8IYD9 372 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 FADS6Q8N9I5 356 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 BANPQ8N9N5 519 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 MCUQ8NE86 351 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 OR4K17Q8NGC6 315 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 RGMAQ96B86 450 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 TMCO6Q96DC7 493 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 COL21A1Q96P44 957 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms