RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 FCRL2Q96LA5 508 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OR5B2Q96R09 309 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ZDHHC11Q9H8X9 412 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 EIF2B4Q9UI10 523 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF281Q9Y2X9 895 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CORINQ9Y5Q5 1042 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TXNDC12O95881 172 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 RPL21P46778 160 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ST3GAL3Q11203 375 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 STXBP6Q8NFX7 210 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TSSK2Q96PF2 358 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PCDHGA6Q9Y5G7 932 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 KHNYNO15037 678 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ATP5A1P25705 553 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PCGF2P35227 344 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 STK19P49842 368 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OC90Q02509 493 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PTSQ03393 145 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PCBP2Q15366 365 aaKnown RBP eCLIP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 GLB1LQ6UWU2 654 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF550Q7Z398 422 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OR2L8Q8NGY9 312 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM231Q9H6L2 316 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 BTNL2Q9UIR0 455 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TRDV1A0A1B0GX56 115 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 HPGDP15428 266 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 IMPA1P29218 277 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 KIAA0141Q14154 515 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM18Q96B42 140 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SERINC2Q96SA4 455 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 DOHHQ9BU89 302 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 GAPDHSO14556 408 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 HGFP14210 728 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CTRB1P17538 263 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MZF1P28698 734 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CBX2Q14781 532 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 GPR157Q5UAW9 335 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CTRB2Q6GPI1 263 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM81Q6P7N7 255 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 GDPD3Q7L5L3 318 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 DIMT1Q9UNQ2 313 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MOKQ9UQ07 419 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 LOC100130705A0A1B0GUX0 176 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ARHGAP33O14559 1287 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 INHAP05111 366 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ITPKAP23677 461 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CDKN2BP42772 138 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 POM121L1PQ3SYA9 428 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TOR2AQ5JU69 321 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ACBD4Q8NC06 268 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OR10G4Q8NGN3 311 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 DPCDQ9BVM2 203 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 THAP2Q9H0W7 228 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MINPP1Q9UNW1 487 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PLEKHM1Q9Y4G2 1056 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SDC1P18827 310 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PAN2Q504Q3 1202 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 C22orf42Q6IC83 251 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 FCAMRQ8WWV6 532 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 NSUN5Q96P11 429 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PTGFRNQ9P2B2 879 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PIAS3Q9Y6X2 628 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CYP17A1P05093 508 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CRHR2Q13324 411 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 NHSL2Q5HYW2 709 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TAF8Q7Z7C8 310 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SIAH3Q8IW03 269 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OR8H1Q8NGG4 311 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SCRN2Q96FV2 425 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CD180Q99467 661 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 KCNK7Q9Y2U2 307 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 DUXBA0A1W2PPF3 345 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 NME1P15531 152 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CRISP1P54107 249 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 KLF1Q13351 362 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ACSF3Q4G176 576 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TRMT12Q53H54 448 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 Q8N9G6 341 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 NDFIP2Q9NV92 336 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 DTYMKP23919 212 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 RBMXP38159 391 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CCR4P51679 360 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 BMPR2Q13873 1038 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 OR4A47Q6IF82 309 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 C2CD4AQ8NCU7 369 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CHDHQ8NE62 594 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 OR4A4PQ8NGN8 299 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ATP13A2Q9NQ11 1180 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 M0R296 226 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SERPINA7P05543 415 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 H1F0P07305 194 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MPIP34949 423 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 RAB13P51153 203 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SLC27A4Q6P1M0 643 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 LEG1Q6P5S2 330 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 BEST3Q8N1M1 668 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 C2orf69Q8N8R5 385 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 URM1Q9BTM9 101 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM43Q9BTV4 400 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MPTX1A8MV57 137 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms