RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 REXO5Q96IC2 774 aaKnown RBP6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 LPAR4Q99677 370 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 ACTRT3Q9BYD9 372 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 TRIM15Q9C019 465 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 OR8D2Q9GZM6 311 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 MUC13Q9H3R2 512 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 IKZF5Q9H5V7 419 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 EPS8L2Q9H6S3 715 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 GPN2Q9H9Y4 310 aaPredicted RBP6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 GPATCH2Q9NW75 528 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 CMTM6Q9NX76 183 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 P2RX2Q9UBL9 471 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 BCAP29Q9UHQ4 241 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 ERVK-11Q9UQG0 969 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 FARSAQ9Y285 508 aaKnown RBP6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 TP53TG5Q9Y2B4 290 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 PCDHGA6Q9Y5G7 932 aa6.3□□□□□ -1.4
RNU1-55P-201ENST00000365510 NUP214P35658 2090 aaPredicted RBP6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 LOC102723996A0A087X1L8 192 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 TTC36A6NLP5 189 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 DUXAA6NLW8 204 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 OR6C76A6NM76 312 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 A8MUA0 341 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 C5orf58C9J3I9 102 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 GSTA4O15217 222 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 SEMA7AO75326 666 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 SEC24DO94855 1032 aaPredicted RBP6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 SOX30O94993 753 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 DDAH2O95865 285 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 CBX7O95931 251 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 AGR2O95994 175 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 IGKV3-11P04433 115 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 ALOX5P09917 674 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 ETFAP13804 333 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 GPX2P18283 190 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 TCN1P20061 433 aaPredicted RBP6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 MATN1P21941 496 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 SSTR4P31391 388 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 OTX2P32243 289 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 PCGF2P35227 344 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 CASRP41180 1078 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 GSK3BP49841 420 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 CASP9P55211 416 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 DSTNP60981 165 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 RPS18P62269 152 aaKnown RBP6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 RBBP4Q09028 425 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 MGAT2Q10469 447 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 CHAF1BQ13112 559 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 CEACAM7Q14002 265 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 FLOT2Q14254 428 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 SSPNQ14714 243 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 EXOSC7Q15024 291 aaKnown RBP6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 EXT1Q16394 746 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 TRMT12Q53H54 448 aaKnown RBP6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 PRR30Q53SZ7 412 aaPredicted RBP6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 COX20Q5RI15 118 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 C1orf146Q5VVC0 180 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 HLA-DQA1Q5Y7H0 255 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 ZNF787Q6DD87 383 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 CDC73Q6P1J9 531 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 DGAT2L6Q6ZPD8 337 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 SLC29A4Q7RTT9 530 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 C16orf62Q7Z3J2 963 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 NET1Q7Z628 596 aaPredicted RBP6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 IFNEQ86WN2 208 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 HPS6Q86YV9 775 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 SLC30A8Q8IWU4 369 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 RNF148Q8N7C7 305 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 COX18Q8N8Q8 333 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 CDRT4Q8N9R6 151 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 B3GNT7Q8NFL0 401 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 OR1N1Q8NGS0 311 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 C16orf52Q8NHV5 167 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 C9orf43Q8TAL5 461 aaPredicted RBP6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 FBXO30Q8TB52 745 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 MIPOL1Q8TD10 442 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 ADAMTS15Q8TE58 950 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 DOK4Q8TEW6 326 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 C8orf44Q96CB5 159 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 ASB9Q96DX5 294 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 GIMAP5Q96F15 307 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 VMP1Q96GC9 406 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 SENP5Q96HI0 755 aaPredicted RBP6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 CLPTM1LQ96KA5 538 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 IP6K3Q96PC2 410 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 STACQ99469 402 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 LMF2Q9BU23 707 aaKnown RBP6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 OR10A5Q9H207 317 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 OR51I1Q9H343 314 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 TMEM38AQ9H6F2 299 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 ANKRA2Q9H9E1 313 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 FOLH1BQ9HBA9 442 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 A4GALTQ9NPC4 353 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 DUSP22Q9NRW4 184 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 EXD2Q9NVH0 621 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 GIN1Q9NXP7 522 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 SLC7A8Q9UHI5 535 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 ZNF639Q9UID6 485 aa6.29□□□□□ -1.4
RNU1-55P-201ENST00000365510 MAGEL2Q9UJ55 1249 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms