RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ISLR2Q6UXK2 745 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 GCNT7Q6ZNI0 430 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 TSEN54Q7Z6J9 526 aaKnown RBP3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 UNC5CLQ8IV45 518 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 ZNF619Q8N2I2 560 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 GPD1LQ8N335 351 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 OR8H1Q8NGG4 311 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 FNDC8Q8TC99 324 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 MRAPQ8TCY5 172 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 C11orf24Q96F05 449 aaPredicted RBP3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 PPP1R16AQ96I34 528 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 SAMD8Q96LT4 415 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 TSPAN18Q96SJ8 248 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 TMEM231Q9H6L2 316 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 IMPAD1Q9NX62 359 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 BCAP29Q9UHQ4 241 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 VSIG4Q9Y279 399 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 KRT87PA6NCN2 255 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 H0YL77 283 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 GJB5O95377 273 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 PTBP3O95758 552 aaKnown RBP3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 TSPAN8P19075 237 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 CHRNA3P32297 505 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 MAGEA9P43362 315 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 NUMBP49757 651 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 SRYQ05066 204 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 SNX1Q13596 522 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 PDIA5Q14554 519 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 BEND6Q5SZJ8 279 aaPredicted RBP3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 ZCCHC12Q6PEW1 402 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 OLFM4Q6UX06 510 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 BAIAP2L2Q6UXY1 529 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 ZNF562Q6V9R5 426 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 KDM8Q8N371 416 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 RNF148Q8N7C7 305 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 VN1R17PQ8TDU5 208 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 MRPL38Q96DV4 380 aaKnown RBP3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 C9orf85Q96MD7 179 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 DCAF13Q9NV06 445 aaKnown RBP3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 PRR34Q9NV39 138 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 FAM120CQ9NX05 1096 aaKnown RBP3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 SOHLH2Q9NX45 425 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 GDAP2Q9NXN4 497 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 P2RX2Q9UBL9 471 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 PLEKHA6Q9Y2H5 1048 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 NTNG1Q9Y2I2 539 aa3.19□□□□□ -1.9
RNU6-560P-201ENST00000364007 RNF103-CHMP3A0A140T963 221 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 FAM168BA1KXE4 195 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 FRG2CA6NGY1 282 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 A8MX80 341 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 NPIPA2E9PIF3 369 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 G3V3Y1 287 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 IGKV3-15P01624 115 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 RALAP11233 206 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 FUT1P19526 365 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 KLK2P20151 261 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 PTPN6P29350 595 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 IL2RGP31785 369 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 OR1D4P47884 311 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 HERVK_113P63132 956 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 ERVK-8P63133 956 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 CXCL6P80162 114 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 MRPS6P82932 125 aaKnown RBP3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 IL1RL1Q01638 556 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 EIF2B1Q14232 305 aaKnown RBP3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 RFTN1Q14699 578 aaPredicted RBP3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 RAB35Q15286 201 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 CDC37Q16543 378 aaPredicted RBP3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 PAMR1Q6UXH9 720 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 HACD2Q6Y1H2 254 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 P4HA3Q7Z4N8 544 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 ZNF584Q8IVC4 421 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 CCDC36Q8IYA8 594 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 ZBED8Q8IZ13 594 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 SPEM1Q8N4L4 309 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 MRPL43Q8N983 215 aaKnown RBP3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 Q8N9G6 341 aaPredicted RBP3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 MINDY2Q8NBR6 621 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 OR56B1Q8NGI3 324 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 DQX1Q8TE96 717 aaKnown RBP3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 U2AF1L4Q8WU68 220 aaKnown RBP3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 FCGR1BQ92637 280 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 ART4Q93070 314 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 MCHR2Q969V1 340 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 FAM111AQ96PZ2 611 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 ERVK-6Q9BXR3 956 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 ATG10Q9H0Y0 220 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 HSD3B7Q9H2F3 369 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 MEPEQ9NQ76 525 aaPredicted RBP3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 GHRLQ9UBU3 117 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 PIN4Q9Y237 131 aaKnown RBP3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 TDRD6O60522 2096 aaKnown RBP3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 ABCC4O15439 1325 aa3.18□□□□□ -1.9
RNU6-560P-201ENST00000364007 METP08581 1390 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 TTC26A0AVF1 554 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 SSX5O60225 188 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 LCMT2O60294 686 aaKnown RBP3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 SLC2A10O95528 541 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 SLC35G4P0C7Q5 338 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 MDH2P40926 338 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms