RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 AQP12BA6NM10 295 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 M0QZQ0 153 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 ONECUT3O60422 494 aaPredicted RBP19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 RAC2P15153 192 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 MAPK3P27361 379 aaPredicted RBP19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 PSMA6P60900 246 aaKnown RBP19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 AQP12AQ8IXF9 295 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 SCRN2Q96FV2 425 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 UBR2Q8IWV8 1755 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 FLRT2O43155 660 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 FPR1P21462 350 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 RPS5P46782 204 aaKnown RBP19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 SCGB1C1Q8TD33 95 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 OSBPL7Q9BZF2 842 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 ALDOAP04075 364 aaKnown RBP19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 ZNF789Q5FWF6 425 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 CCNJQ5T5M9 372 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 SLC27A4Q6P1M0 643 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 METTL2BQ6P1Q9 378 aaKnown RBP19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 DPAGT1Q9H3H5 408 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 ENAMQ9NRM1 1142 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 NPC1O15118 1278 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 SIGLEC6O43699 453 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 THBS2P35442 1172 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 UGT3A2Q3SY77 523 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 CDHR3Q6ZTQ4 885 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 LINC00471Q8N535 108 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 ZNF160Q9HCG1 818 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 TMEM19Q96HH6 336 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 HAO2Q9NYQ3 351 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 KIAA0355O15063 1070 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 PBX2P40425 430 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 SGSHP51688 502 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 OR1D5P58170 312 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 MLF2Q15773 248 aaPredicted RBP19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 ZNF584Q8IVC4 421 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 CENPSQ8N2Z9 138 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 FBXL8Q96CD0 374 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 ZNF175Q9Y473 711 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 NUP98P52948 1817 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 A0A096LPI6 279 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 PRKXP51817 358 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 DNAJB13P59910 316 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 TAP2Q03519 686 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 IL26Q9NPH9 171 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 NKX1-2Q9UD57 310 aaPredicted RBP19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 FBP2O00757 339 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 CHRM4P08173 479 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 ERVPABLB-1P60509 514 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 C22orf42Q6IC83 251 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 CYB561A3Q8NBI2 242 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 NEIL2Q969S2 332 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 NECAB3Q96P71 396 aaPredicted RBP19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 ACTRT3Q9BYD9 372 aa19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 MCTS1Q9ULC4 181 aaKnown RBP19.22■□□□□ 0.67
CDC42BPB-201ENST00000361246 C2orf72A6NCS6 295 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 SLC35E2BP0CK96 405 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 LAMP1P11279 417 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 PYCR1P32322 319 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 UNQ6126/PRO20091Q6UXV3 157 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 TEX19Q8NA77 164 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 SLC37A3Q8NCC5 494 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 SLC22A4Q9H015 551 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 FOLH1BQ9HBA9 442 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 SLC22A2O15244 555 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 AQP9O43315 295 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 FBXO45P0C2W1 286 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 GID4Q8IVV7 300 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 CD300LFQ8TDQ1 290 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 POPDC3Q9HBV1 291 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 KCNIP1Q9NZI2 227 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 CNIH4Q9P003 139 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 FETUBQ9UGM5 382 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 CD68P34810 354 aaPredicted RBP19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 RGS6P49758 472 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 TDGQ13569 410 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 TSSK4Q6SA08 328 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 MAMDC2Q7Z304 686 aaPredicted RBP19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 NRMQ8IXM6 262 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 CHFRQ96EP1 664 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 KRBA1A5PL33 1030 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 SHISA7A6NL88 538 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 HNRNPA1L2Q32P51 320 aaKnown RBP19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 ZNF585AQ6P3V2 769 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 EDAQ92838 391 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 ZNF845Q96IR2 970 aaPredicted RBP19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 OBP2BQ9NPH6 170 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 KLHL9Q9P2J3 617 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 DBHP09172 617 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 NDUFV2P19404 249 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 TMEM69Q5SWH9 247 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 PARM1Q6UWI2 310 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 OR51T1Q8NGJ9 327 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 SNIP1Q8TAD8 396 aaKnown RBP19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 SAMD8Q96LT4 415 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 RTP3Q9BQQ7 232 aa19.21■□□□□ 0.67
CDC42BPB-201ENST00000361246 OR14J1Q9UGF5 321 aa19.21■□□□□ 0.66
CDC42BPB-201ENST00000361246 KCNN3Q9UGI6 736 aa19.21■□□□□ 0.66
CDC42BPB-201ENST00000361246 FMO6PO60774 539 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms