RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 MED26O95402 600 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 BUD31P41223 144 aaPredicted RBP21.2■□□□□ 0.98
LDB1-201ENST00000361198 MAN2A2P49641 1150 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 SNRPGP62308 76 aaKnown RBP21.2■□□□□ 0.98
LDB1-201ENST00000361198 SELENBP1Q13228 472 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 Q6ZS52 159 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 OR4N4Q8N0Y3 316 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 GPBAR1Q8TDU6 330 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 TXNDC15Q96J42 360 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 UCK2Q9BZX2 261 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 TMEM74BQ9NUR3 256 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 MKLN1Q9UL63 735 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 MGAT4BQ9UQ53 548 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 CFL2Q9Y281 166 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 A0A0G2JPF8 293 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 HNRNPCL2B2RXH8 293 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 HNRNPCL3B7ZW38 293 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 KIAA0513O60268 411 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 TPST2O60704 377 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 UGT2B17O75795 530 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 OXSR1O95747 527 aaPredicted RBP21.2■□□□□ 0.98
LDB1-201ENST00000361198 LGI1O95970 557 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 TNFP01375 233 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 CELA2BP08218 269 aaPredicted RBP21.2■□□□□ 0.98
LDB1-201ENST00000361198 IGFBP1P08833 259 aaPredicted RBP21.2■□□□□ 0.98
LDB1-201ENST00000361198 HNRNPCL4P0DMR1 293 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 CPN2P22792 545 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 RABIFP47224 123 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 TNFRSF17Q02223 184 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 ILKQ13418 452 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 RUNX2Q13950 521 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 GNA13Q14344 377 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 SUZ12Q15022 739 aaKnown RBP21.2■□□□□ 0.98
LDB1-201ENST00000361198 MED22Q15528 200 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 PGBD2Q6P3X8 592 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 WDR53Q7Z5U6 358 aaPredicted RBP21.2■□□□□ 0.98
LDB1-201ENST00000361198 FAM83FQ8NEG4 500 aaPredicted RBP21.2■□□□□ 0.98
LDB1-201ENST00000361198 COL26A1Q96A83 441 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 GIMAP5Q96F15 307 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 CPNE7Q9UBL6 633 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 NDRG2Q9UN36 371 aaKnown RBP21.2■□□□□ 0.98
LDB1-201ENST00000361198 SLC9A8Q9Y2E8 581 aa21.2■□□□□ 0.98
LDB1-201ENST00000361198 TDRD6O60522 2096 aaKnown RBP21.19■□□□□ 0.98
LDB1-201ENST00000361198 PRAMEF26H0Y7S4 382 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 ARHGAP33O14559 1287 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 SOX14O95416 240 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 OSMP13725 252 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 PVRP15151 417 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 LSSP48449 732 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 SEPHS1P49903 392 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 COL19A1Q14993 1142 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 TDHQ8IZJ6 230 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 HTRA1Q92743 480 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 ZG16BQ96DA0 208 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 EVA1BQ9NVM1 165 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 CYP8B1Q9UNU6 501 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 USP34Q70CQ2 3546 aa21.19■□□□□ 0.98
LDB1-201ENST00000361198 PNMA8CA0A1B0GUJ8 204 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 KCNK2O95069 426 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 SOX6P35712 828 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 DOC2BQ14184 412 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 SSX1Q16384 188 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 TSTQ16762 297 aaKnown RBP21.18■□□□□ 0.98
LDB1-201ENST00000361198 TMEM201Q5SNT2 666 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 OR4N5Q8IXE1 308 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 SERINC2Q96SA4 455 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 SLC38A1Q9H2H9 487 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 PCDHGB6Q9Y5F9 930 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 A0A1W2PRQ8 180 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 XKP51811 444 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 SMIM11AP58511 58 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 SIM1P81133 766 aaPredicted RBP21.18■□□□□ 0.98
LDB1-201ENST00000361198 RHAGQ02094 409 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 CHRNEQ04844 493 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 C6orf132Q5T0Z8 1188 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 PODNL1Q6PEZ8 512 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 FAM111BQ6SJ93 734 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 CCDC190Q86UF4 302 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 OR7G2Q8NG99 324 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 TOE1Q96GM8 510 aaKnown RBP21.18■□□□□ 0.98
LDB1-201ENST00000361198 TRNT1Q96Q11 434 aaKnown RBP21.18■□□□□ 0.98
LDB1-201ENST00000361198 C11orf16Q9NQ32 467 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 CTPS2Q9NRF8 586 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 MAN2C1Q9NTJ4 1040 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 DAPP1Q9UN19 280 aa21.18■□□□□ 0.98
LDB1-201ENST00000361198 GTF2E2P29084 291 aaKnown RBP21.17■□□□□ 0.98
LDB1-201ENST00000361198 EIF2B5Q13144 721 aaKnown RBP21.17■□□□□ 0.98
LDB1-201ENST00000361198 TARDBPQ13148 414 aaKnown RBP eCLIP21.17■□□□□ 0.987e-8■■■■□ 24.7
LDB1-201ENST00000361198 SLX4IPQ5VYV7 408 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 SHISA5Q8N114 240 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 LRRC25Q8N386 305 aaPredicted RBP21.17■□□□□ 0.98
LDB1-201ENST00000361198 WDR36Q8NI36 951 aaKnown RBP21.17■□□□□ 0.98
LDB1-201ENST00000361198 ZFYVE21Q9BQ24 234 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 FNDC11Q9BVV2 318 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 ROGDIQ9GZN7 287 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 POT1Q9NUX5 634 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 PHF11Q9UIL8 331 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 MRPS2Q9Y399 296 aaKnown RBP21.17■□□□□ 0.98
LDB1-201ENST00000361198 A0A075B6Q4 140 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms