RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 IMP4Q96G21 291 aaKnown RBP8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF419Q96HQ0 510 aaPredicted RBP8.35□□□□□ -1.07
COL6A6-201ENST00000358511 TMEM98Q9Y2Y6 226 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 UNC13CQ8NB66 2214 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 LOC105369274A0A096LPK9 316 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF726A6NNF4 738 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 SULT1C4O75897 302 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 RAB8AP61006 207 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 RBMS2Q15434 407 aaKnown RBP8.35□□□□□ -1.07
COL6A6-201ENST00000358511 BAK1Q16611 211 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 GAREM2Q75VX8 874 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 OR4N4Q8N0Y3 316 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 DNAJC22Q8N4W6 341 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 OR9Q2Q8NGE9 314 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 SLC19A3Q9BZV2 496 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 GPR52Q9Y2T5 361 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 A0A0A6YYH2 397 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 A6NJ64 397 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 RHPN2P1A8MT19 583 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 PHYHO14832 338 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 AGPAT2O15120 278 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 RAD51DO75771 328 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 LALBAP00709 142 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 MFSD13AQ14CX5 517 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 MINDY4Q4G0A6 757 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 PGM2L1Q6PCE3 622 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 VASH1Q7L8A9 365 aaPredicted RBP8.35□□□□□ -1.07
COL6A6-201ENST00000358511 NRSN1Q8IZ57 195 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ANKRD53Q8N9V6 530 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 BOLLQ8N9W6 283 aaKnown RBP8.35□□□□□ -1.07
COL6A6-201ENST00000358511 KIAA1143Q96AT1 154 aaPredicted RBP8.35□□□□□ -1.07
COL6A6-201ENST00000358511 PPP4R1LQ9P1A2 415 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 VSTM5A8MXK1 200 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 MUSKO15146 869 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 CASC3O15234 703 aaKnown RBP8.35□□□□□ -1.07
COL6A6-201ENST00000358511 PSMD8P48556 350 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 MASP1P48740 699 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 VEGFCP49767 419 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 CXCL9Q07325 125 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 IQCF1Q8N6M8 205 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ANKK1Q8NFD2 765 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 OR4Q3Q8NH05 313 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 CARS2Q9HA77 564 aaKnown RBP8.35□□□□□ -1.07
COL6A6-201ENST00000358511 IGSF5Q9NSI5 407 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ENPP4Q9Y6X5 453 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 hCG_1807616A0A1W2PRN6 198 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 GPR4P46093 362 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ITPRIPL2Q3MIP1 535 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ENPP7Q6UWV6 458 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 GPR149Q86SP6 731 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 OR10K1Q8NGX5 313 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 LRRC15Q8TF66 581 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 MRGPRX2Q96LB1 330 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 PCTPQ9UKL6 214 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 CBY1Q9Y3M2 126 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 OR6C6A6NF89 314 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 CCDC85CA6NKD9 419 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 RNF13O43567 381 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 SLC43A1O75387 559 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 GSRP00390 522 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 PLGP00747 810 aaPredicted RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 MSX1P28360 303 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 NFATC2Q13469 925 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 PTPRRQ15256 657 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 LARP4Q71RC2 724 aaKnown RBP eCLIP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 PXT1Q8NFP0 134 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 OR5H2Q8NGV7 314 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 BRIX1Q8TDN6 353 aaKnown RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 SAMD11Q96NU1 681 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ENY2Q9NPA8 101 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 SMCO4Q9NRQ5 59 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ELOVL2Q9NXB9 296 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 RALGAPA1Q6GYQ0 2036 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF705FA8MVS1 300 aaPredicted RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF705DP0CH99 300 aaPredicted RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF705BP0CI00 300 aaPredicted RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 M6PRP20645 277 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 GPX3P22352 226 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 IL13RA1P78552 427 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF791Q3KP31 576 aaPredicted RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ADGRF1Q5T601 910 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ALKAL2Q6UX46 152 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 LAS2Q8IYD9 372 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 FOXRED1Q96CU9 486 aaPredicted RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 URM1Q9BTM9 101 aaKnown RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 CACNA1DQ01668 2161 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 TDRD6O60522 2096 aaKnown RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 FABP7O15540 132 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 SOCS5O75159 536 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 GABARAPO95166 117 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ALPIP09923 528 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF26P17031 533 aaPredicted RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 GABRR2P28476 465 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 C1orf94Q6P1W5 598 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 CHST9Q7L1S5 443 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 DPPA2Q7Z7J5 298 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 DNAJC5GQ8N7S2 189 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 AVL9Q8NBF6 648 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 DPF1Q92782 380 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 C17orf62Q9BQA9 187 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms