RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 SLC6A15Q9H2J7 730 aa18.74■□□□□ 0.59
PPP1CA-202ENST00000358239 TUBB1Q9H4B7 451 aa18.74■□□□□ 0.59
PPP1CA-202ENST00000358239 ANKRA2Q9H9E1 313 aa18.74■□□□□ 0.59
PPP1CA-202ENST00000358239 C19orf53Q9UNZ5 99 aaPredicted RBP18.74■□□□□ 0.59
PPP1CA-202ENST00000358239 EXO1Q9UQ84 846 aaKnown RBP18.74■□□□□ 0.59
PPP1CA-202ENST00000358239 RNF6Q9Y252 685 aa18.74■□□□□ 0.59
PPP1CA-202ENST00000358239 PTGDR2Q9Y5Y4 395 aa18.74■□□□□ 0.59
PPP1CA-202ENST00000358239 TACC2O95359 2948 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 LSM1O15116 133 aaKnown RBP18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 RGS16O15492 202 aaPredicted RBP18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 TBX19O60806 448 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 REM1O75628 298 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 TRAPPC6AO75865 159 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 LINC00032P0C843 101 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 DDX5P17844 614 aaKnown RBP18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 TACR1P25103 407 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 PTPN6P29350 595 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 MC3RP41968 323 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 ASMTP46597 345 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 PNLIPRP2P54317 469 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 CORO7P57737 925 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 NUP107P57740 925 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 RPL38P63173 70 aaKnown RBP18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 ZNF844Q08AG5 666 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 PMPCAQ10713 525 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 C1orf185Q5T7R7 199 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 DDIASQ8IXT1 998 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 OR2L13Q8N349 312 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 LILRB4Q8NHJ6 448 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 GNRHR2Q96P88 292 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 NODALQ96S42 347 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 TTYH2Q9BSA4 534 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 GLIPR2Q9H4G4 154 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 SSU72Q9NP77 194 aaKnown RBP18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 DDX18Q9NVP1 670 aaKnown RBP18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 TNFRSF10DQ9UBN6 386 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 FAM215AQ9Y5M1 114 aa18.73■□□□□ 0.59
PPP1CA-202ENST00000358239 C15orf38-AP3S2A0A0A6YYH1 394 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 PRAMEF25A6NGN4 478 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 TMEM114B3SHH9 223 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 SNPHO15079 494 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 ICOSLGO75144 302 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 PSMG1O95456 288 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 BPGMP07738 259 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 SDC1P18827 310 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 MAPK1P28482 360 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 IL12BP29460 328 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 ETV4P43268 484 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 ZNF155Q12901 538 aaPredicted RBP18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 SF3B4Q15427 424 aaKnown RBP eCLIP18.72■□□□□ 0.592e-6■■□□□ 11.7
PPP1CA-202ENST00000358239 PRSS53Q2L4Q9 553 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 UGT3A2Q3SY77 523 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 RFTN2Q52LD8 501 aaPredicted RBP18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 NHSL2Q5HYW2 709 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 SH2D4BQ5SQS7 431 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 TMEM107Q6UX40 140 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 ANGPTL8Q6UXH0 198 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 CROCCP2Q86T23 111 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 RPRMLQ8N4K4 120 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 ZFP28Q8NHY6 868 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 MTERF3Q96E29 417 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 EGLN2Q96KS0 407 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 PPP3R2Q96LZ3 170 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 REEP4Q9H6H4 257 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 OR10H1Q9Y4A9 318 aa18.72■□□□□ 0.59
PPP1CA-202ENST00000358239 TTC36A6NLP5 189 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 TMEM233B4DJY2 109 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 UPK1AO00322 258 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 GNB5O14775 395 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 PIP5K1BO14986 540 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 PDPK1O15530 556 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 TSPAN2O60636 221 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 CBR3O75828 277 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 GLI4P10075 376 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 CREB1P16220 341 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 GCKP35557 465 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 PTGDSP41222 190 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 TRPC1P48995 793 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 PSG6Q00889 435 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 TOMM20Q15388 145 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 ZNHIT3Q15649 155 aaPredicted RBP18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 GALNTL6Q49A17 601 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 CYP27C1Q4G0S4 372 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 RTL6Q6ICC9 239 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 NPSR1Q6W5P4 371 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 ZCCHC23Q6ZST2 131 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 LARP4Q71RC2 724 aaKnown RBP eCLIP18.71■□□□□ 0.592e-7■□□□□ 10.4
PPP1CA-202ENST00000358239 GDF7Q7Z4P5 450 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 SLC44A2Q8IWA5 706 aaPredicted RBP18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 MCEMP1Q8IX19 187 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 PM20D2Q8IYS1 436 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 OR6Y1Q8NGX8 325 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 PPCDCQ96CD2 204 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 ELP4Q96EB1 424 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 ADOQ96SZ5 270 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 SPOCK3Q9BQ16 436 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 MRTO4Q9UKD2 239 aaKnown RBP18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 MED12LQ86YW9 2145 aa18.71■□□□□ 0.59
PPP1CA-202ENST00000358239 ANKRD17O75179 2603 aaKnown RBP18.7■□□□□ 0.58
PPP1CA-202ENST00000358239 AHRRA9YTQ3 701 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms