RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 GABRA1P14867 456 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 RPL3P39023 403 aaKnown RBP15.72■□□□□ 0.11
NCL-202ENST00000356936 CORO7P57737 925 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 ZNF155Q12901 538 aaPredicted RBP15.72■□□□□ 0.11
NCL-202ENST00000356936 ATP6AP1LQ52LC2 224 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 TIGD3Q6B0B8 471 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 ZNF585AQ6P3V2 769 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 LRIG3Q6UXM1 1119 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 R3HCC1LQ7Z5L2 792 aaKnown RBP15.72■□□□□ 0.11
NCL-202ENST00000356936 EXOC3L1Q86VI1 746 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 SLC44A2Q8IWA5 706 aaPredicted RBP15.72■□□□□ 0.11
NCL-202ENST00000356936 KIRREL3Q8IZU9 778 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 OR5M9Q8NGP3 310 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 OR6Y1Q8NGX8 325 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 GFM2Q969S9 779 aaKnown RBP15.72■□□□□ 0.11
NCL-202ENST00000356936 SDCCAG3Q96C92 435 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 ELP4Q96EB1 424 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 ZBED6CLQ96FA7 236 aaPredicted RBP15.72■□□□□ 0.11
NCL-202ENST00000356936 PGM2Q96G03 612 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 GNRHR2Q96P88 292 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 ZIM3Q96PE6 472 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 TSSK3Q96PN8 268 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 MRTO4Q9UKD2 239 aaKnown RBP15.72■□□□□ 0.11
NCL-202ENST00000356936 HRH3Q9Y5N1 445 aa15.72■□□□□ 0.11
NCL-202ENST00000356936 SPTBN1Q01082 2364 aaKnown RBP15.72■□□□□ 0.11
NCL-202ENST00000356936 PRAMEF25A6NGN4 478 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 TTC36A6NLP5 189 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 FAM47E-STBD1D6RA91 191 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 UPK1AO00322 258 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 AKAP10O43572 662 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 ICOSLGO75144 302 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 SERPINE1P05121 402 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 HPNP05981 417 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 BCKDHAP12694 445 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 GPC1P35052 558 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 PTGER4P35408 488 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 GCKP35557 465 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 CDK9P50750 372 aaKnown RBP15.71■□□□□ 0.11
NCL-202ENST00000356936 PNLIPRP2P54317 469 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 PRSS53Q2L4Q9 553 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 CYP27C1Q4G0S4 372 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 XKR7Q5GH72 579 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 NCCRP1Q6ZVX7 275 aaPredicted RBP15.71■□□□□ 0.11
NCL-202ENST00000356936 LARP4Q71RC2 724 aaKnown RBP eCLIP15.71■□□□□ 0.115e-8■■□□□ 12.7
NCL-202ENST00000356936 NTNG2Q96CW9 530 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 NODALQ96S42 347 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 ADOQ96SZ5 270 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 UBQLN3Q9H347 655 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 SH3BP4Q9P0V3 963 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 ZDHHC2Q9UIJ5 367 aa15.71■□□□□ 0.11
NCL-202ENST00000356936 C15orf38-AP3S2A0A0A6YYH1 394 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 GNB5O14775 395 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 PEX11AO75192 247 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 ENDOUP21128 410 aaKnown RBP15.7■□□□□ 0.1
NCL-202ENST00000356936 GRK2P25098 689 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 CHRNB4P30926 498 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 HPCAL1P37235 193 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 TRPC1P48995 793 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 MANFP55145 182 aaKnown RBP15.7■□□□□ 0.1
NCL-202ENST00000356936 PSG6Q00889 435 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 PMPCAQ10713 525 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 HSPB3Q12988 150 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 PDE7AQ13946 482 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 TOMM20Q15388 145 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 SF3B4Q15427 424 aaKnown RBP eCLIP15.7■□□□□ 0.14e-68■■■■■ 29.5
NCL-202ENST00000356936 CHI3L2Q15782 390 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 TNFAIP8L3Q5GJ75 292 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 FNDC7Q5VTL7 733 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 ANGPTL8Q6UXH0 198 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 NPSR1Q6W5P4 371 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 B3GNT6Q6ZMB0 384 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 MARVELD2Q8N4S9 558 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 MARVELD3Q96A59 401 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 SLC6A15Q9H2J7 730 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 Q9N2J8 555 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 KCNK9Q9NPC2 374 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 ACSS1Q9NUB1 689 aaPredicted RBP15.7■□□□□ 0.1
NCL-202ENST00000356936 SPRR3Q9UBC9 169 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 BAIAP2L1Q9UHR4 511 aa15.7■□□□□ 0.1
NCL-202ENST00000356936 SNPHO15079 494 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 TSPAN2O60636 221 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 LYPLA1O75608 230 aaPredicted RBP15.69■□□□□ 0.1
NCL-202ENST00000356936 CBR3O75828 277 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 PSMG1O95456 288 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 PRPS2P11908 318 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 PTPN6P29350 595 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 ARRB2P32121 409 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 PSMD4P55036 377 aaKnown RBP15.69■□□□□ 0.1
NCL-202ENST00000356936 ABCE1P61221 599 aaKnown RBP15.69■□□□□ 0.1
NCL-202ENST00000356936 MAD2L1Q13257 205 aaPredicted RBP15.69■□□□□ 0.1
NCL-202ENST00000356936 DECR1Q16698 335 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 VPS26BQ4G0F5 336 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 ANKRD26P1Q6NSI1 321 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 PM20D2Q8IYS1 436 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 CEP70Q8NHQ1 597 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 CLHC1Q8NHS4 586 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 TUBGCP3Q96CW5 907 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 PKNOX2Q96KN3 472 aa15.69■□□□□ 0.1
NCL-202ENST00000356936 PRPF18Q99633 342 aaKnown RBP15.69■□□□□ 0.1
NCL-202ENST00000356936 TTYH2Q9BSA4 534 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms