RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 IGF2P01344 180 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 NR2F6P10588 404 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 SDHBP21912 280 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 LIMS1P48059 325 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 RPS14P62263 151 aaKnown RBP14.85□□□□□ -0.03
RTN3-205ENST00000356000 HMGCS1Q01581 520 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 MELKQ14680 651 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 CDNFQ49AH0 187 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 MOB3CQ70IA8 216 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 IKBIPQ70UQ0 350 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 FAM122BQ7Z309 247 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 MARCH9Q86YJ5 346 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 GPSM1Q86YR5 675 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 MISPQ8IVT2 679 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 ARIH2OSQ8N7S6 290 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 RNF149Q8NC42 400 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 AKR7LQ8NHP1 331 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 SELENOMQ8WWX9 145 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 SLC2A13Q96QE2 648 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 TMEM39BQ9GZU3 492 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 PIGMQ9H3S5 423 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 TCF7L1Q9HCS4 588 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 TAS2R13Q9NYV9 303 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 FKBPLQ9UIM3 349 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 OR2W5A6NFC9 320 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 WASH3PC4AMC7 463 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 PPEF2O14830 753 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 MATN3O15232 486 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 STAG3L1P0CL83 205 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 COX5BP10606 129 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 ADCYAP1P18509 176 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 CHI3L1P36222 383 aaPredicted RBP14.85□□□□□ -0.03
RTN3-205ENST00000356000 ACY1Q03154 408 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 OCLNQ16625 522 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 C10orf91Q5T1B1 145 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 MRNIPQ6NTE8 343 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 CPXCR1Q8N123 301 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 OR6K3Q8NGY3 331 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
RTN3-205ENST00000356000 OPA3Q9H6K4 179 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 FAM50BQ9Y247 325 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 SNX10Q9Y5X0 201 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 PRR23D1E9PI22 279 aaPredicted RBP14.84□□□□□ -0.03
RTN3-205ENST00000356000 GP1BAP07359 652 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 NUDT7P0C024 238 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 PRR23D2P0DMB1 279 aaPredicted RBP14.84□□□□□ -0.03
RTN3-205ENST00000356000 CPN1P15169 458 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 LAG3P18627 525 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 CNR1P21554 472 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 DRD5P21918 477 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 SELENOWP63302 87 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 ADIGQ0VDE8 80 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 LAMTOR4Q0VGL1 99 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 OR2G6Q5TZ20 316 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 RNF165Q6ZSG1 346 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 PRICKLE2Q7Z3G6 844 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 STK40Q8N2I9 435 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 NKAPQ8N5F7 415 aaKnown RBP14.84□□□□□ -0.03
RTN3-205ENST00000356000 AQP11Q8NBQ7 271 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 PXYLP1Q8TE99 480 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 HASPINQ8TF76 798 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 ZCCHC2Q9C0B9 1178 aaKnown RBP14.84□□□□□ -0.03
RTN3-205ENST00000356000 WDR26Q9H7D7 661 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 TEX10Q9NXF1 929 aaPredicted RBP14.84□□□□□ -0.03
RTN3-205ENST00000356000 TESQ9UGI8 421 aaKnown RBP14.84□□□□□ -0.03
RTN3-205ENST00000356000 KCTD3Q9Y597 815 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 A0A1B0GUH1 482 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 TMEM129A0AVI4 362 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 HEPACAM2A8MVW5 462 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 MAFKO60675 156 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 SC5DO75845 299 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 PCP4P48539 62 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 HMGA2P52926 109 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 CASP6P55212 293 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 RAB4BP61018 213 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 MAT1AQ00266 395 aaKnown RBP14.84□□□□□ -0.03
RTN3-205ENST00000356000 FABP9Q0Z7S8 132 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 PCBP2Q15366 365 aaKnown RBP eCLIP14.84□□□□□ -0.033e-35■■■■■ 31.2
RTN3-205ENST00000356000 UAP1L1Q3KQV9 507 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 SLC22A10Q63ZE4 541 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 WDR53Q7Z5U6 358 aaPredicted RBP14.84□□□□□ -0.03
RTN3-205ENST00000356000 CRYBG2Q8N1P7 616 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 CHST14Q8NCH0 376 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 VOPP1Q96AW1 172 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 POLDIP3Q9BY77 421 aaKnown RBP14.84□□□□□ -0.03
RTN3-205ENST00000356000 RBM22Q9NW64 420 aaKnown RBP eCLIP14.84□□□□□ -0.03
RTN3-205ENST00000356000 NFKBIL1Q9UBC1 381 aaPredicted RBP14.84□□□□□ -0.03
RTN3-205ENST00000356000 ZMYM5Q9UJ78 669 aa14.84□□□□□ -0.03
RTN3-205ENST00000356000 CARHSP1Q9Y2V2 147 aaKnown RBP14.84□□□□□ -0.03
RTN3-205ENST00000356000 E9PI62 339 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 NIPSNAP2O75323 286 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 RECQL4O94761 1208 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 SPDEFO95238 335 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 ADH1CP00326 375 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 OTCP00480 354 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 GASTP01350 101 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 ZNF865P0CJ78 1059 aaPredicted RBP14.83□□□□□ -0.03
RTN3-205ENST00000356000 ACPPP15309 386 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 AP1S1P61966 158 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 ACVR1Q04771 509 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms