RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 SYNDIG1Q9H7V2 258 aa17.13■□□□□ 0.33
SPNS3-201ENST00000355530 ERI3O43414 337 aaKnown RBP17.12■□□□□ 0.33
SPNS3-201ENST00000355530 NFATC1O95644 943 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 HIST1H1TP22492 207 aaPredicted RBP17.12■□□□□ 0.33
SPNS3-201ENST00000355530 IFNA8P32881 189 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 PTGER1P34995 402 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 BCL6P41182 706 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 CDH11P55287 796 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 ST3GAL3Q11203 375 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 QPRTQ15274 297 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 PIP5KL1Q5T9C9 394 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 TMEM107Q6UX40 140 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 UTS2BQ765I0 119 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 MEX3DQ86XN8 651 aaKnown RBP17.12■□□□□ 0.33
SPNS3-201ENST00000355530 ATP6V1C2Q8NEY4 427 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 PIGXQ8TBF5 258 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 CNRIP1Q96F85 164 aaPredicted RBP17.12■□□□□ 0.33
SPNS3-201ENST00000355530 C12orf66Q96MD2 445 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 RAB11FIP5Q9BXF6 653 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 TEX12Q9BXU0 123 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 KLHL31Q9H511 634 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 CALML5Q9NZT1 146 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 CNIH4Q9P003 139 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 ASB4Q9Y574 426 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 NUMA1Q14980 2115 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 A0A1W2PR48 441 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 SMIM30A4D0T7 59 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 CASKO14936 926 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 CHST10O43529 356 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 ALPPL2P10696 532 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 DMPKQ09013 629 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 DSG2Q14126 1118 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 WSCD2Q2TBF2 565 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 GAB4Q2WGN9 574 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 ZNF697Q5TEC3 545 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 MRM1Q6IN84 353 aaKnown RBP17.12■□□□□ 0.33
SPNS3-201ENST00000355530 METAP1DQ6UB28 335 aaPredicted RBP17.12■□□□□ 0.33
SPNS3-201ENST00000355530 RRM2BQ7LG56 351 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 SHFQ7M4L6 423 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 OR8K5Q8NH50 307 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 POF1BQ8WVV4 589 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 SUSD6Q92537 303 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 OSTF1Q92882 214 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 MS4A6EQ96DS6 147 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 FAM46AQ96IP4 442 aaKnown RBP17.12■□□□□ 0.33
SPNS3-201ENST00000355530 BTBD1Q9H0C5 482 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 SLC38A1Q9H2H9 487 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 CLCA2Q9UQC9 943 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 ATG4BQ9Y4P1 393 aa17.12■□□□□ 0.33
SPNS3-201ENST00000355530 IGLON5A6NGN9 336 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 PGRMC2O15173 223 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 PLA2G10O15496 165 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 AKAP8O43823 692 aaKnown RBP17.11■□□□□ 0.33
SPNS3-201ENST00000355530 AIFM1O95831 613 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 ZNF24P17028 368 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 FPR3P25089 353 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 CTNNB1P35222 781 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 OMPP47874 163 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 ARFIP1P53367 373 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 MLF2Q15773 248 aaPredicted RBP17.11■□□□□ 0.33
SPNS3-201ENST00000355530 UAP1L1Q3KQV9 507 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 CLEC12AQ5QGZ9 265 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 TRIQKQ629K1 86 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 PRICKLE2Q7Z3G6 844 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 CCDC116Q8IYX3 515 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 ACOT4Q8N9L9 421 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 C16orf58Q96GQ5 468 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 RNF170Q96K19 258 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 OR7D2Q96RA2 312 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 SEMA4GQ9NTN9 838 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 MED17Q9NVC6 651 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 PRKAG2Q9UGJ0 569 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 NDRG2Q9UN36 371 aaKnown RBP17.11■□□□□ 0.33
SPNS3-201ENST00000355530 LIPT1Q9Y234 373 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 INSL6Q9Y581 213 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 NOX1Q9Y5S8 564 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 MYO10Q9HD67 2058 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 CPSF4LA6NMK7 179 aaKnown RBP17.11■□□□□ 0.33
SPNS3-201ENST00000355530 CENPBD1B2RD01 187 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 C4orf51C9J302 202 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 LRRTM2O43300 516 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 EMC8O43402 210 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 SCO2O43819 266 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 YES1P07947 543 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 CSNK2A2P19784 350 aaPredicted RBP17.11■□□□□ 0.33
SPNS3-201ENST00000355530 PTBP1P26599 531 aaKnown RBP eCLIP17.11■□□□□ 0.33
SPNS3-201ENST00000355530 PKLRP30613 574 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 SSTR4P31391 388 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 VIPR2P41587 438 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 KIR2DL3P43628 341 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 DUSP2Q05923 314 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 ACSM1Q08AH1 577 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 MAP4K2Q12851 820 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 SLC48A1Q6P1K1 146 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 ABHD17CQ6PCB6 329 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 CNIH2Q6PI25 160 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 SFTPA1Q8IWL2 248 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 ARIH2OSQ8N7S6 290 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 OR2L8Q8NGY9 312 aa17.11■□□□□ 0.33
SPNS3-201ENST00000355530 TRIM43Q96BQ3 446 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms