RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 GPRC5BQ9NZH0 403 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 ABRACLQ9P1F3 81 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 AFDNP55196 1824 aaKnown RBP12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 FAM230AA0A1W2PPH8 454 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC43A1O75387 559 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 SYPP08247 313 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 GJA1P17302 382 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 ETV6P41212 452 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 PREPP48147 710 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 MEF2DQ14814 521 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 PLPP4Q5VZY2 271 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 GPR149Q86SP6 731 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 DNAJC5GQ8N7S2 189 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 CARS2Q9HA77 564 aaKnown RBP12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 KLK4Q9Y5K2 254 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 A0A1B0GV50 99 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 GLOD5A6NK44 160 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 ENDOUP21128 410 aaKnown RBP12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 MCCD1P59942 119 aaPredicted RBP12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 LRIT3Q3SXY7 679 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF585AQ6P3V2 769 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 CRTC1Q6UUV9 634 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 C15orf39Q6ZRI6 1047 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR52E2Q8NGJ4 325 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR5D16Q8NGK9 328 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 HERVK_113Q902F9 699 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 GGHQ92820 318 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 RBPMSQ93062 196 aaKnown RBP12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 SHISA4Q96DD7 197 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 PRRT1Q99946 306 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 TMEM121BQ9BXQ6 578 aaPredicted RBP12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 SYNPO2LQ9H987 977 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 SNED1Q8TER0 1413 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 HSBP1L1C9JCN9 74 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 RDH16O75452 317 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 KCNC1P48547 511 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 AVPI1Q5T686 147 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 C22orf39Q6P5X5 142 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZER1Q7Z7L7 766 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 CCDC71Q8IV32 467 aaPredicted RBP12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR2T4Q8NH00 348 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 RELTQ969Z4 430 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 INPP5KQ9BT40 448 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 A3GALT2U3KPV4 340 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF705GA8MUZ8 300 aaPredicted RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 HRH2P25021 359 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 TM4SF1P30408 202 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 SHMT2P34897 504 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 TRIM23P36406 574 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 PGGT1BP53609 377 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 GTDC1Q4AE62 458 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 ALKBH2Q6NS38 261 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 METTL2BQ6P1Q9 378 aaKnown RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 PRSS55Q6UWB4 352 aaPredicted RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF417Q8TAU3 575 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 MAL2Q969L2 176 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 E9PI62 339 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 EIF3FO00303 357 aaPredicted RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 SEC14L2O76054 403 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 SNRNP70P08621 437 aaKnown RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 JUNBP17275 347 aaPredicted RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 HTR6P50406 440 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 CRYZQ08257 329 aaKnown RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 TMEM115Q12893 351 aaPredicted RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 C1orf220Q5T0J3 134 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 TPRA1Q86W33 373 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 PRSS58Q8IYP2 241 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 KIAA1143Q96AT1 154 aaPredicted RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 KCTD12Q96CX2 325 aaKnown RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF778Q96MU6 729 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 SPIN2AQ99865 258 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 SPIN2BQ9BPZ2 258 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 TXNL4BQ9NX01 149 aaKnown RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 COPS3Q9UNS2 423 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF736B4DX44 427 aaPredicted RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 CSTAP01040 98 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZBTB48P10074 688 aaPredicted RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 LAMP1P11279 417 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 TAS2R20P59543 309 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 MEF2AQ02078 507 aaPredicted RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF546Q86UE3 836 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 CCDC71LQ8N9Z2 235 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 SPRYD4Q8WW59 207 aaPredicted RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 GIMAP1Q8WWP7 306 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 PRODH2Q9UF12 536 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 EMCNQ9ULC0 261 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 GPR45Q9Y5Y3 372 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 CFAP20Q9Y6A4 193 aaKnown RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 AGPAT2O15120 278 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC16A8O95907 504 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 GCAP28676 217 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 CLRN1P58418 232 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 NKX3-2P78367 333 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 LRFN4Q6PJG9 635 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 Q6ZVU0 165 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 C14orf80Q86SX3 495 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 RETREG3Q86VR2 466 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 VAPAQ9P0L0 249 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 A0A1W2PPL8 197 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 CACNG3O60359 315 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms