RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 RPLP0P05388 317 aaKnown RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ACSM4P0C7M7 580 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 NME1P15531 152 aaKnown RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 CD22P20273 847 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 NDUFS1P28331 727 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 UGT2B15P54855 530 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 SCN1BQ07699 218 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 PRKG2Q13237 762 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ALKBH2Q6NS38 261 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 SLCO4C1Q6ZQN7 724 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 Q6ZSR9 355 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 VWA5B2Q8N398 1253 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 TMEM105Q8N8V8 129 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 BEST4Q8NFU0 473 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ZFPM2Q8WW38 1151 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 MED8Q96G25 268 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 NPAS1Q99742 590 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 HOPXQ9BPY8 73 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ESRP2Q9H6T0 727 aaKnown RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ACTR8Q9H981 624 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 MLXQ9UH92 298 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 FBXL2Q9UKC9 423 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 PLAGL1Q9UM63 463 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 PCDHA9Q9Y5H5 950 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 COLEC10Q9Y6Z7 277 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 E7EQ34 232 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 NPIPB8E9PQR5 432 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 MANBAO00462 879 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 SLC22A2O15244 555 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 LRRTM2O43300 516 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 LAMTOR5O43504 91 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 CRCPO75575 148 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 PTHP01270 115 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 APEHP13798 732 aaKnown RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 HSD17B1P14061 328 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 UGT2B10P36537 528 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 MRPL19P49406 292 aaKnown RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 VSX2P58304 361 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 TSTQ16762 297 aaKnown RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ATG9BQ674R7 924 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 GRHL2Q6ISB3 625 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 LINC01555Q8NAE3 123 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 OR2L8Q8NGY9 312 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 OR2T11Q8NH01 316 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 OR10A6Q8NH74 314 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 CXorf58Q96LI9 332 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 IL17FQ96PD4 163 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 IMP3Q9NV31 184 aaKnown RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 VNN3Q9NY84 501 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 TAAR2Q9P1P5 351 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 FBXO4Q9UKT5 387 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 PADI2Q9Y2J8 665 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 FABP12A6NFH5 140 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 H0YIV9 168 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 PCDH17O14917 1159 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 PRICKLE3O43900 615 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ZNF682O95780 498 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 HOXB3P14651 431 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 HTR6P50406 440 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 RAB28P51157 221 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 GABARAPL2P60520 117 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 CHIT1Q13231 466 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 MAB21L1Q13394 359 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ABRAXAS2Q15018 415 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 LARS2Q15031 903 aaKnown RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 FCN2Q15485 313 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 RNASE12Q5GAN4 147 aaKnown RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 PMS2CLQ68D20 193 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ZNF782Q6ZMW2 699 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 SLC34A3Q8N130 599 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 OR52E1Q8NGJ3 308 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 COQ8AQ8NI60 647 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 DNAJA4Q8WW22 397 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ADAMTS14Q8WXS8 1223 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 SMPDL3AQ92484 453 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ATOH1Q92858 354 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 NEIL2Q969S2 332 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 SLC47A1Q96FL8 570 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 QRFPRQ96P65 431 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 OR5M11Q96RB7 305 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 NRTNQ99748 197 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 LRRC61Q9BV99 259 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 SMURF1Q9HCE7 757 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ATXN7L1Q9ULK2 861 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ABCG2Q9UNQ0 655 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 ICKQ9UPZ9 632 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 SH2B3Q9UQQ2 575 aa9.51□□□□□ -0.89
SYNE1-203ENST00000354674 FANCMQ8IYD8 2048 aa9.5□□□□□ -0.89
SYNE1-203ENST00000354674 BET1O15155 118 aa9.5□□□□□ -0.89
SYNE1-203ENST00000354674 CELA2BP08218 269 aaPredicted RBP9.5□□□□□ -0.89
SYNE1-203ENST00000354674 APEX1P27695 318 aaKnown RBP9.5□□□□□ -0.89
SYNE1-203ENST00000354674 RPS19P39019 145 aaKnown RBP9.5□□□□□ -0.89
SYNE1-203ENST00000354674 DCTP40126 519 aa9.5□□□□□ -0.89
SYNE1-203ENST00000354674 SLC19A1P41440 591 aa9.5□□□□□ -0.89
SYNE1-203ENST00000354674 ATP4BP51164 291 aa9.5□□□□□ -0.89
SYNE1-203ENST00000354674 RPS7P62081 194 aaKnown RBP9.5□□□□□ -0.89
SYNE1-203ENST00000354674 UBE2IP63279 158 aaKnown RBP9.5□□□□□ -0.89
SYNE1-203ENST00000354674 DOC2AQ14183 400 aa9.5□□□□□ -0.89
SYNE1-203ENST00000354674 GRK1Q15835 563 aa9.5□□□□□ -0.89
SYNE1-203ENST00000354674 KLHL12Q53G59 568 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms