RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 C2orf80Q0P641 193 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 PDE7AQ13946 482 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 SEC23BQ15437 767 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 SPHARQ15513 63 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF630Q2M218 657 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-204ENST00000353317 ZFP69Q49AA0 526 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 ARMC4Q5T2S8 1044 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 TMPRSS11AQ6ZMR5 421 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 UBALD2Q8IYN6 164 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 TAGAPQ8N103 731 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 MMP21Q8N119 569 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 FLVCR1-AS1Q8TAF5 88 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 SETD7Q8WTS6 366 aaKnown RBP8.09□□□□□ -1.11
TRIM55-204ENST00000353317 PPCDCQ96CD2 204 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 HSPA12BQ96MM6 686 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 PHOX2BQ99453 314 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 SRRQ9GZT4 340 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 SLC6A20Q9NP91 592 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 WDR70Q9NW82 654 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 TAAR2Q9P1P5 351 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 REV1Q9UBZ9 1251 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 GRIP1Q9Y3R0 1128 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 SNX11Q9Y5W9 270 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 A0A1W2PQ09 198 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 MEIOCA2RUB1 952 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 TLR4O00206 839 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 TFECO14948 347 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 CASC3O15234 703 aaKnown RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 GUCY1B2O75343 617 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 IFNA14P01570 189 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 F3P13726 295 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 ENDOUP21128 410 aaKnown RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 CSTF2P33240 577 aaKnown RBP eCLIP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 SOAT1P35610 550 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 DDOSTP39656 456 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 ALDH9A1P49189 494 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 CSNK1EP49674 416 aaKnown RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 RORCP51449 518 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 PSPHP78330 225 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 CSNK1G2P78368 415 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 MRPS15P82914 257 aaKnown RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 ZXDAP98168 799 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 MXD1Q05195 221 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 ARHGAP19Q14CB8 494 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 TAB1Q15750 504 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 PAQR6Q6TCH4 344 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 WASH2PQ6VEQ5 465 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 DGLUCYQ7Z3D6 616 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 KRT73Q86Y46 540 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 RAB43Q86YS6 212 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 ADGRF3Q8IZF5 1079 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 SHISA5Q8N114 240 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 AMER3Q8N944 861 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 C16orf78Q8WTQ4 265 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 APOBEC4Q8WW27 367 aaKnown RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 KLHDC7BQ96G42 594 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 FCRL4Q96PJ5 515 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 LRRC61Q9BV99 259 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 MMP28Q9H239 520 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 WASH6PQ9NQA3 447 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 DYRK1BQ9Y463 629 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 A0A1W2PRB8 838 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 SLC35F4A4IF30 521 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 CENPXA8MT69 81 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 C4orf51C9J302 202 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 ZNF670-ZNF695F2Z2N8 137 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 SCO2O43819 266 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 KCNJ13O60928 360 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 KLK1P06870 262 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 OSMP13725 252 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 CD27P26842 260 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 PPP1CAP62136 330 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 SNRPGP62308 76 aaKnown RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 RPS26P62854 115 aaKnown RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 GPR18Q14330 331 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 CDK10Q15131 360 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 TBRG1Q3YBR2 411 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 PRRT3Q5FWE3 981 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 LIPKQ5VXJ0 399 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 FAM71E1Q6IPT2 247 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 ZNF438Q7Z4V0 828 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 MAML2Q8IZL2 1156 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 ASCC1Q8N9N2 400 aaKnown RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 OR2L8Q8NGY9 312 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 KLHL6Q8WZ60 621 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 SMPDL3AQ92484 453 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 TMEM80Q96HE8 168 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 TTYH2Q9BSA4 534 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 ZNF717Q9BY31 904 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 POLR2J2Q9GZM3 115 aaKnown RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 SLC6A16Q9GZN6 736 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 KIR3DX1Q9H7L2 352 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 DMRT3Q9NQL9 472 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 PLSCR3Q9NRY6 295 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 NDUFB11Q9NX14 153 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 ANGPT4Q9Y264 503 aa8.08□□□□□ -1.12
TRIM55-204ENST00000353317 TNRC6BQ9UPQ9 1833 aaKnown RBP8.08□□□□□ -1.12
TRIM55-204ENST00000353317 HYKKA2RU49 373 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 H3BN98 237 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms