RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 RAB41Q5JT25 222 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 AVPI1Q5T686 147 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 PLPPR4Q7Z2D5 763 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 MRPL10Q7Z7H8 261 aaKnown RBP12.5□□□□□ -0.41
IFT88-202ENST00000351808 PHOSPHO2Q8TCD6 241 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 TADA1Q96BN2 335 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 QRSL1Q9H0R6 528 aaKnown RBP12.5□□□□□ -0.41
IFT88-202ENST00000351808 POLR2J3Q9H1A7 115 aaKnown RBP12.5□□□□□ -0.41
IFT88-202ENST00000351808 GAREM1Q9H706 876 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 ZNF275Q9NSD4 429 aaPredicted RBP12.5□□□□□ -0.41
IFT88-202ENST00000351808 FKBPLQ9UIM3 349 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 RASD1Q9Y272 281 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 PLEKHM1Q9Y4G2 1056 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 FXYD6-FXYD2A0A087WZ82 144 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 TMEM82A0PJX8 343 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 KPNA3O00505 521 aaPredicted RBP12.5□□□□□ -0.41
IFT88-202ENST00000351808 RECQL4O94761 1208 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 SERPINA3P01011 423 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 LIMS3P0CW19 117 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 LIMS4P0CW20 117 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 MC4RP32245 332 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 SYTL3Q4VX76 610 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 ZNF852Q6ZMS4 543 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 TMEM17Q86X19 198 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 SLITRK4Q8IW52 837 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 HDDC3Q8N4P3 179 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 GANCQ8TET4 914 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 GEMIN6Q8WXD5 167 aaKnown RBP12.5□□□□□ -0.41
IFT88-202ENST00000351808 CHFRQ96EP1 664 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 RNFT2Q96EX2 444 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 PCED1BQ96HM7 432 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 SPSB2Q99619 263 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 CINPQ9BW66 212 aaPredicted RBP12.5□□□□□ -0.41
IFT88-202ENST00000351808 FXYD6Q9H0Q3 95 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 NANSQ9NR45 359 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 TMEM161AQ9NX61 479 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 MED11Q9P086 117 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 PIM2Q9P1W9 311 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 MBD2Q9UBB5 411 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 SMIM28A0A1B0GU29 152 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 FFAR1O14842 300 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 IRAK2O43187 625 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 ADAP00813 363 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 POMCP01189 267 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 S100A8P05109 93 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 KLK3P07288 261 aaPredicted RBP12.49□□□□□ -0.41
IFT88-202ENST00000351808 NPR2P20594 1047 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 AKR1C2P52895 323 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 ARFIP1P53367 373 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 LILRA4P59901 499 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 OC90Q02509 493 aaPredicted RBP12.49□□□□□ -0.41
IFT88-202ENST00000351808 AKR1C1Q04828 323 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 TMEM255AQ5JRV8 349 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 NCEH1Q6PIU2 408 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 MACC1Q6ZN28 852 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 GLT6D1Q7Z4J2 308 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 FAM26EQ8N5C1 309 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 RXFP4Q8TDU9 374 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 ELP5Q8TE02 316 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 THAP4Q8WY91 577 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 PAWRQ96IZ0 340 aaKnown RBP12.49□□□□□ -0.41
IFT88-202ENST00000351808 SPATA33Q96N06 139 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 MS4A4EQ96PG1 132 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 CPEB1Q9BZB8 566 aaKnown RBP12.49□□□□□ -0.41
IFT88-202ENST00000351808 TIMM13Q9Y5L4 95 aaPredicted RBP12.49□□□□□ -0.41
IFT88-202ENST00000351808 HS3ST4Q9Y661 456 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 TRBC2A0A5B9 178 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 OR6C74A6NCV1 312 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 ARHGEF33A8MVX0 844 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 WRBO00258 174 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 THP07101 528 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 GIPP09681 153 aaPredicted RBP12.49□□□□□ -0.41
IFT88-202ENST00000351808 AMD1P17707 334 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 RAD52P43351 418 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 OR10A3P58181 314 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 RAP2BP61225 183 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 SCARB2Q14108 478 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 CXorf57Q6NSI4 855 aaKnown RBP12.49□□□□□ -0.41
IFT88-202ENST00000351808 RNF165Q6ZSG1 346 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 TSPAN33Q86UF1 283 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 DMBX1Q8NFW5 382 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 OR11G2Q8NGC1 345 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 SYT17Q9BSW7 474 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 FUZQ9BT04 418 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 TMPRSS13Q9BYE2 586 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 C11orf49Q9H6J7 331 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 GPATCH2Q9NW75 528 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 FAM120CQ9NX05 1096 aaKnown RBP12.49□□□□□ -0.41
IFT88-202ENST00000351808 ZNF69Q9UC07 566 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 DHRS7Q9Y394 339 aa12.49□□□□□ -0.41
IFT88-202ENST00000351808 C1orf226A1L170 272 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 POM121BA6NF01 834 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 HHLA1C9JL84 531 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 PRAMEF2O60811 474 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 CDC123O75794 336 aaPredicted RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 PRF1P14222 555 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 TTPAP49638 278 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 ARHGEF7Q14155 803 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 C9orf152Q5JTZ5 239 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 RTP2Q5QGT7 225 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms