RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 FKBP14Q9NWM8 211 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 UCKL1Q9NWZ5 548 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 REV1Q9UBZ9 1251 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 FTSJ1Q9UET6 329 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 RSL24D1Q9UHA3 163 aaKnown RBP6.47□□□□□ -1.37
TRIM55-203ENST00000350034 NDOR1Q9UHB4 597 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ENOPH1Q9UHY7 261 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 DOLKQ9UPQ8 538 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 PLCL2Q9UPR0 1127 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SATB2Q9UPW6 733 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 MGAT4BQ9UQ53 548 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SLC9A8Q9Y2E8 581 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SIT1Q9Y3P8 196 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 CLDN16Q9Y5I7 305 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 MDC1Q14676 2089 aaKnown RBP6.46□□□□□ -1.37
TRIM55-203ENST00000350034 ARHGEF17Q96PE2 2063 aaPredicted RBP6.46□□□□□ -1.37
TRIM55-203ENST00000350034 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 SH3PXD2BA1X283 911 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ZAR1LA6NP61 321 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 H3BMH7 237 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 HRO43593 1189 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 XPNPEP2O43895 674 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 FCMRO60667 390 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 TPST2O60704 377 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 CTNSO60931 367 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 LDB3O75112 727 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 NME6O75414 186 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 SOX30O94993 753 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 NSA2O95478 260 aaKnown RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 CBX7O95931 251 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 TP53P04637 393 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ALPPP05187 535 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 THBS1P07996 1170 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 CT62P0C5K7 136 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 TDGF1P13385 188 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 RNH1P13489 461 aaKnown RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 S1PR1P21453 382 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 NT5EP21589 574 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 CHMP24386 653 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 FMO3P31513 532 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 CTSKP43235 329 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 GCGRP47871 477 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 FNTBP49356 437 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 PDX1P52945 283 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 CRISP1P54107 249 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 GFERP55789 205 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 SH3BGRP55822 239 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 IL1RL1Q01638 556 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 BNC1Q01954 994 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ALDH6A1Q02252 535 aaKnown RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ID2Q02363 134 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 DUSP8Q13202 625 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ILKQ13418 452 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 PIN1Q13526 163 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 DEFB133Q30KQ1 61 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 DEFB110Q30KQ9 67 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 GPAT3Q53EU6 434 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF311Q5JNZ3 666 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 WDR45BQ5MNZ6 344 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 DCST1Q5T197 706 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 TYW3Q6IPR3 259 aaKnown RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 PGBD2Q6P3X8 592 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 KLHL17Q6TDP4 642 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 DEF8Q6ZN54 512 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 Q6ZPB1 254 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 FAM92BQ6ZTR7 304 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 VRK2Q86Y07 508 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 SLC25A45Q8N413 288 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 LINC00471Q8N535 108 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 CDRT4Q8N9R6 151 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 MORN4Q8NDC4 146 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 BPIFB6Q8NFQ5 453 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 OR6C4Q8NGE1 309 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 VANGL1Q8TAA9 524 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF420Q8TAQ5 688 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 SLC7A13Q8TCU3 470 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 IPCEF1Q8WWN9 437 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 DIO2Q92813 273 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 PMM1Q92871 262 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 CDS1Q92903 461 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 UBE2FQ969M7 185 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 MUL1Q969V5 352 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 NMD3Q96D46 503 aaKnown RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ZG16BQ96DA0 208 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 NODALQ96S42 347 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 SDF2Q99470 211 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ADNPQ9H2P0 1102 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ANKRD19PQ9H560 264 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 MTHFD2LQ9H903 347 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF556Q9HAH1 456 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 CXorf21Q9HAI6 301 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 EQTNQ9NQ60 294 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 POLE3Q9NRF9 147 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF226Q9NYT6 803 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 TMEM9Q9P0T7 183 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 ERVK-18Q9QC07 812 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 RHCGQ9UBD6 479 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 TMCC3Q9ULS5 477 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 RNF6Q9Y252 685 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 GPR55Q9Y2T6 319 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms