RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 TMEM25Q86YD3 366 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 LRRC17Q8N6Y2 441 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 ZNF655Q8N720 491 aaPredicted RBP16.74■□□□□ 0.27
VHL-202ENST00000345392 TEX47Q8TBZ9 253 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 SPRYD4Q8WW59 207 aaPredicted RBP16.74■□□□□ 0.27
VHL-202ENST00000345392 AP2M1Q96CW1 435 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 GPR137Q96N19 417 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 YIPF4Q9BSR8 244 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 THAP7Q9BT49 309 aaPredicted RBP16.74■□□□□ 0.27
VHL-202ENST00000345392 NUDT15Q9NV35 164 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 MRPS18AQ9NVS2 196 aaKnown RBP16.74■□□□□ 0.27
VHL-202ENST00000345392 IL20RAQ9UHF4 553 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 PLAGL1Q9UM63 463 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 HS3ST2Q9Y278 367 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 NEDD8-MDP1E9PL57 170 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 NR2F1P10589 423 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 BUD31P41223 144 aaPredicted RBP16.73■□□□□ 0.27
VHL-202ENST00000345392 CDH11P55287 796 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 DUSP6Q16828 381 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 CD300LDQ6UXZ3 194 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 WASH2PQ6VEQ5 465 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 KLBQ86Z14 1044 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 OR5P2Q8WZ92 322 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 SMG7Q92540 1137 aaKnown RBP16.73■□□□□ 0.27
VHL-202ENST00000345392 F2RL3Q96RI0 385 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 QRSL1Q9H0R6 528 aaKnown RBP16.73■□□□□ 0.27
VHL-202ENST00000345392 ISYNA1Q9NPH2 558 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 IMP3Q9NV31 184 aaKnown RBP16.73■□□□□ 0.27
VHL-202ENST00000345392 ZFR2Q9UPR6 939 aaKnown RBP16.73■□□□□ 0.27
VHL-202ENST00000345392 TEX28O15482 410 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 CXCL3P19876 107 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 CCT3P49368 545 aaKnown RBP16.73■□□□□ 0.27
VHL-202ENST00000345392 PRLHRP49683 370 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 ATP12AP54707 1039 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 POLR2LP62875 67 aaKnown RBP16.73■□□□□ 0.27
VHL-202ENST00000345392 RIN1Q13671 783 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 PLA1AQ53H76 456 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 TPGS2Q68CL5 300 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 VASNQ6EMK4 673 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 TMEM91Q6ZNR0 172 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 PRICKLE2Q7Z3G6 844 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 GHDCQ8N2G8 530 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 CYB5D2Q8WUJ1 264 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 SMPDL3AQ92484 453 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 OR51I1Q9H343 314 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 PIGUQ9H490 435 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 FOLH1BQ9HBA9 442 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 FRS3O43559 492 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 SSTR2P30874 369 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 ANGPT1Q15389 498 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 ENTPD8Q5MY95 495 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 BICRALQ6AI39 1079 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 SLC30A6Q6NXT4 461 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 ZNF782Q6ZMW2 699 aaPredicted RBP16.73■□□□□ 0.27
VHL-202ENST00000345392 TRAM1L1Q8N609 369 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 LSMEM1Q8N8F7 131 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 BBS1Q8NFJ9 593 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 GLYATL1Q969I3 302 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 TM4SF18Q96CE8 201 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 WDR34Q96EX3 536 aa16.73■□□□□ 0.27
VHL-202ENST00000345392 A0A087WUU8 490 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 LINC00862A6NCI5 91 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 SNTNA6NMZ2 147 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 LEFTY2O00292 366 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 EEF1E1O43324 174 aaKnown RBP16.72■□□□□ 0.27
VHL-202ENST00000345392 OLFM2O95897 454 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 TBX6O95947 436 aaPredicted RBP16.72■□□□□ 0.27
VHL-202ENST00000345392 VIPR1P32241 457 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 ATP6V1E1P36543 226 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 PRKAG1P54619 331 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 RGS1Q08116 209 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 COL9A2Q14055 689 aaPredicted RBP16.72■□□□□ 0.27
VHL-202ENST00000345392 FGFBP1Q14512 234 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 TMEM107Q6UX40 140 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 IKBIPQ70UQ0 350 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 MSANTD3Q96H12 275 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 DPCDQ9BVM2 203 aaPredicted RBP16.72■□□□□ 0.27
VHL-202ENST00000345392 SGPP1Q9BX95 441 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 CDCP1Q9H5V8 836 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 SLCO1C1Q9NYB5 712 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 CHD7Q9P2D1 2997 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 LOC105369274A0A096LPK9 316 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 LEFTY1O75610 366 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 OR7A10O76100 309 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 HK1P19367 917 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 POLR2CP19387 275 aaPredicted RBP16.72■□□□□ 0.27
VHL-202ENST00000345392 PTNP21246 168 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 PTBP1P26599 531 aaKnown RBP eCLIP16.72■□□□□ 0.27
VHL-202ENST00000345392 ZNF267Q14586 743 aaPredicted RBP16.72■□□□□ 0.27
VHL-202ENST00000345392 NDUFA9Q16795 377 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 RNASE12Q5GAN4 147 aaKnown RBP16.72■□□□□ 0.27
VHL-202ENST00000345392 TRMT11Q7Z4G4 463 aaKnown RBP16.72■□□□□ 0.27
VHL-202ENST00000345392 OR4N4Q8N0Y3 316 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 OR2A12Q8NGT7 310 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 FAM46AQ96IP4 442 aaKnown RBP16.72■□□□□ 0.27
VHL-202ENST00000345392 SECISBP2Q96T21 854 aaKnown RBP16.72■□□□□ 0.27
VHL-202ENST00000345392 ZSCAN5AQ9BUG6 496 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 C11orf49Q9H6J7 331 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 ISG20L2Q9H9L3 353 aaKnown RBP16.72■□□□□ 0.27
VHL-202ENST00000345392 ENAMQ9NRM1 1142 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms