RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CSNK2A1P68400 391 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 BMP8AQ7Z5Y6 402 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 MFSD4AQ8N468 514 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 SIGLECL1Q8N7X8 197 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 CSNK2A3Q8NEV1 391 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR8J3Q8NGG0 315 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR1E3Q8WZA6 343 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 POLR2J2Q9GZM3 115 aaKnown RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ACSS1Q9NUB1 689 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TRAPPC2LQ9UL33 140 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR2AG2A6NM03 316 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 QSOX1O00391 747 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 SOCS7O14512 581 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 PCDH8O95206 1070 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 NR2F1P10589 423 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 NUDT6P53370 316 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 HSF1Q00613 529 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 NCEH1Q6PIU2 408 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 CLEC9AQ6UXN8 241 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 FAM185AQ8N0U4 392 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR6T1Q8NGN1 323 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 IFNW1P05000 195 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR5AC1P0C628 307 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 CRISP1P54107 249 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 SLC7A9P82251 487 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 HEPACAMQ14CZ8 416 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OTUD1Q5VV17 481 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF454Q8N9F8 522 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 SEMA4DQ92854 862 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ISL2Q96A47 359 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 FBXO6Q9NRD1 293 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 INPP5EQ9NRR6 644 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 DOK5Q9P104 306 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OSGIN1Q9UJX0 560 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 INTS1Q8N201 2190 aaKnown RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ELOVL7A1L3X0 281 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TPPP2P59282 170 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 GRM7Q14831 915 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR4D1Q15615 310 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF697Q5TEC3 545 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR6B2Q6IFH4 312 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 PLBD1Q6P4A8 553 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 BATF2Q8N1L9 274 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 CRYBG2Q8N1P7 616 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 FAM163AQ96GL9 167 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 C3orf30Q96M34 536 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TSSK3Q96PN8 268 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 GORASP2Q9H8Y8 452 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 DUS2Q9NX74 493 aaKnown RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ADAMTS6Q9UKP5 1117 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TMPRSS11EQ9UL52 423 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 MYO3AQ8NEV4 1616 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF705FA8MVS1 300 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 K7EPK0 472 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 PGLSO95336 258 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 GH1P01241 217 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF705DP0CH99 300 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF705BP0CI00 300 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 CT45A8P0DMV1 189 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 CT45A9P0DMV2 189 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 PEX3P56589 373 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 MAPK14Q16539 360 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 CT45A2Q5DJT8 189 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF550Q7Z398 422 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 NPAS3Q8IXF0 933 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 FAM71E2Q8N5Q1 922 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF738Q8NE65 137 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR5B17Q8NGF7 314 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 EGLN1Q9GZT9 426 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ABCG5Q9H222 651 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 LMTK3Q96Q04 1460 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TRPM1Q7Z4N2 1603 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 PRAMEF27A3QJZ7 478 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 PRAMEF25A6NGN4 478 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 PRAMEF4O60810 478 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 RPL10P27635 214 aaKnown RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ACTBL2Q562R1 376 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 EOGTQ5NDL2 527 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 PRAMEF9Q5VWM5 478 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ATP5SQ99766 215 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 STRA6Q9BX79 667 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 MIR1-1HGQ9H1L0 117 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ADCY10Q96PN6 1610 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 LEFTY2O00292 366 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TP73O15350 636 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 LRRC26Q2I0M4 334 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF630Q2M218 657 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 SFT2D3Q587I9 215 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OGFOD2Q6N063 350 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM270Q6UE05 265 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 SLC16A14Q7RTX9 510 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 C17orf78Q8N4C9 275 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 IP6K1Q92551 441 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 EXOSC8Q96B26 276 aaKnown RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 THAP7Q9BT49 309 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ALG12Q9BV10 488 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 HDAC8Q9BY41 377 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 COA3Q9Y2R0 106 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ERVPABLB-1P60509 514 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 FGFBP1Q14512 234 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms