RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SLC16A11Q8NCK7 471 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 ZNF681Q96N22 645 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 ZNF582Q96NG8 517 aaPredicted RBP13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 TRNT1Q96Q11 434 aaKnown RBP13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 TPK1Q9H3S4 243 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 SEMA4GQ9NTN9 838 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 CHCHD3Q9NX63 227 aaKnown RBP13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 HEBP2Q9Y5Z4 205 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 GSAPA4D1B5 854 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 TAF4O00268 1085 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 MED26O95402 600 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 TRHRP34981 398 aaPredicted RBP13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 ETV5P41161 510 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 EIF2B2P49770 351 aaKnown RBP13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 ETV1P50549 477 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 MXD1Q05195 221 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 CBX3Q13185 183 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 NCF4Q15080 339 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 PRRT3Q5FWE3 981 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 ATAT1Q5SQI0 421 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 C1orf94Q6P1W5 598 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 C19orf48Q6RUI8 117 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 KIAA1324Q6UXG2 1013 aaKnown RBP13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 ASPGQ86U10 573 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 OR7G2Q8NG99 324 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 OR52I1Q8NGK6 324 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 TEX47Q8TBZ9 253 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 SIPA1Q96FS4 1042 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 CEP19Q96LK0 163 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 POLMQ9NP87 494 aaPredicted RBP13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 SNTG1Q9NSN8 517 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 TMEM74BQ9NUR3 256 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 OR6C2Q9NZP2 312 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 IL20RAQ9UHF4 553 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 CFL2Q9Y281 166 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 CASC3O15234 703 aaKnown RBP13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 P2RX6O15547 441 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 LRRTM2O43300 516 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 CYP7B1O75881 506 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 CCNYL3P0C7X3 344 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 CPN2P22792 545 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 TNFRSF4P43489 277 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 RGS1Q08116 209 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 HYAL1Q12794 435 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 COX10Q12887 443 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 USP30Q70CQ3 517 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 RRM2BQ7LG56 351 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 NANOGP1Q8N7R0 232 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 OR8D4Q8NGM9 314 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 ADAMTS15Q8TE58 950 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 HPS1Q92902 700 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 CDS1Q92903 461 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 SLC35A4Q96G79 324 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 POLDIP3Q9BY77 421 aaKnown RBP13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 CHST2Q9Y4C5 530 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 PEX16Q9Y5Y5 336 aa13.96□□□□□ -0.17
VIPAS39-202ENST00000343765 KDM1AO60341 852 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 EIF2S1P05198 315 aaKnown RBP13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 POLR2CP19387 275 aaPredicted RBP13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 RPS19P39019 145 aaKnown RBP13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 SMSP52788 366 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 C1DQ13901 141 aaKnown RBP13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 OCLNQ16625 522 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 NDUFA9Q16795 377 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 SPANXN2Q5MJ10 180 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 PSD4Q8NDX1 1056 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 MOAP1Q96BY2 351 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 C14orf119Q9NWQ9 140 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 SAGE2PA6NJ88 616 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 CTSVO60911 334 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 KCNJ13O60928 360 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 SPNP16150 400 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 PSMA1P25786 263 aaKnown RBP13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 ACSL1P33121 698 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 GPR4P46093 362 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 RGS8P57771 180 aaPredicted RBP13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 PRKCDQ05655 676 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 CCNJQ5T5M9 372 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 OR2G6Q5TZ20 316 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 NKAIN4Q8IVV8 208 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 FAM26EQ8N5C1 309 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 OR52P1PQ8NH57 321 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 GAL3ST3Q96A11 431 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 GIMAP5Q96F15 307 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 ACTRT3Q9BYD9 372 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 SAP130Q9H0E3 1048 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 ERVK13-1Q9NX77 482 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 A3GALT2U3KPV4 340 aa13.95□□□□□ -0.18
VIPAS39-202ENST00000343765 SMIM30A4D0T7 59 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 RAB36O95755 333 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 SLC35G6P0C7Q6 338 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 RPS15AP62244 130 aaKnown RBP13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 CDK5Q00535 292 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 ZNF45Q02386 682 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 ZNF181Q2M3W8 571 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 AGAP7PQ5VUJ5 663 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 TUBA3EQ6PEY2 450 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 PLEKHM3Q6ZWE6 761 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 LRRC25Q8N386 305 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms