RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 APCDD1LQ8NCL9 501 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 HIPK4Q8NE63 616 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 OR6Y1Q8NGX8 325 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 HOXB13Q92826 284 aaPredicted RBP9.54□□□□□ -0.88
TPM3-207ENST00000341372 TANKQ92844 425 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 COX4I2Q96KJ9 171 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 KCNA7Q96RP8 456 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 NPAS2Q99743 824 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 TNFRSF12AQ9NP84 129 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 NMRK1Q9NWW6 199 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 SIRT5Q9NXA8 310 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 VPS29Q9UBQ0 182 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 B3GNT3Q9Y2A9 372 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 SHANK1Q9Y566 2161 aa9.54□□□□□ -0.88
TPM3-207ENST00000341372 A0A1W2PR48 441 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 TRIM64CA6NLI5 447 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 NPIPB8E9PQR5 432 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 FGF17O60258 216 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 AIFM1O95831 613 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 NR2F6P10588 404 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 SERPINB5P36952 375 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 SLC18A1P54219 525 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 BIKQ13323 160 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 B3GNTL1Q67FW5 361 aaPredicted RBP9.53□□□□□ -0.88
TPM3-207ENST00000341372 C18orf63Q68DL7 685 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 CYP20A1Q6UW02 462 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 CLNKQ7Z7G1 428 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 B3GNT7Q8NFL0 401 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 GOT1L1Q8NHS2 421 aaPredicted RBP9.53□□□□□ -0.88
TPM3-207ENST00000341372 HAS2Q92819 552 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 CNDP1Q96KN2 507 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 CCT8L2Q96SF2 557 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 HBEGFQ99075 208 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 RPF2Q9H7B2 306 aaKnown RBP9.53□□□□□ -0.88
TPM3-207ENST00000341372 INTS9Q9NV88 658 aaKnown RBP9.53□□□□□ -0.88
TPM3-207ENST00000341372 PTGFRNQ9P2B2 879 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 TIMM22Q9Y584 194 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 GCN1Q92616 2671 aaKnown RBP9.53□□□□□ -0.88
TPM3-207ENST00000341372 GMNCA6NCL1 334 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 ACOT7O00154 380 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 LDB3O75112 727 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 BPGMP07738 259 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 DRD4P21917 467 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 TLX1P31314 330 aaPredicted RBP9.53□□□□□ -0.88
TPM3-207ENST00000341372 KIR3DL1P43629 444 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 PCBP3P57721 371 aaKnown RBP9.53□□□□□ -0.88
TPM3-207ENST00000341372 TRA2BP62995 288 aaKnown RBP9.53□□□□□ -0.88
TPM3-207ENST00000341372 ATG16L1Q676U5 607 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 OR52E8Q6IFG1 317 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 CDPF1Q6NVV7 123 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 FDX2Q6P4F2 183 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 GALNT18Q6P9A2 607 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 TMEM132CQ8N3T6 1108 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 OR14A16Q8NHC5 309 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 CFHR4Q92496 578 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 MECRQ9BV79 373 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 ALOXE3Q9BYJ1 711 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 KCNK13Q9HB14 408 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 KCNK9Q9NPC2 374 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 TEX10Q9NXF1 929 aaPredicted RBP9.53□□□□□ -0.88
TPM3-207ENST00000341372 TEKT2Q9UIF3 430 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 ZNF223Q9UK11 482 aaPredicted RBP9.53□□□□□ -0.88
TPM3-207ENST00000341372 CSAG2Q9Y5P2 127 aa9.53□□□□□ -0.88
TPM3-207ENST00000341372 TMEM82A0PJX8 343 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 ERICH4A6NGS2 130 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 FAM171A2A8MVW0 826 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 TM9SF1O15321 606 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 PRKRAO75569 313 aaKnown RBP9.52□□□□□ -0.89
TPM3-207ENST00000341372 MYO1DO94832 1006 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 GBAP04062 536 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 KLK1P06870 262 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 UROSP10746 265 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 FOLH1Q04609 750 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 TLE1Q04724 770 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 STX4Q12846 297 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 TBCEQ15813 527 aaPredicted RBP9.52□□□□□ -0.89
TPM3-207ENST00000341372 FLYWCH1Q4VC44 716 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 SPIN4Q56A73 249 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 ACER2Q5QJU3 275 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 CYP2R1Q6VVX0 501 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 LINC00696Q6ZRV3 163 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 H1FNTQ75WM6 255 aaPredicted RBP9.52□□□□□ -0.89
TPM3-207ENST00000341372 CUZD1Q86UP6 607 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 CRLF3Q8IUI8 442 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 KIF2BQ8N4N8 673 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 SLC5A8Q8N695 610 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 C1orf52Q8N6N3 182 aaKnown RBP9.52□□□□□ -0.89
TPM3-207ENST00000341372 MORN4Q8NDC4 146 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 DNAJB14Q8TBM8 379 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 BCAS4Q8TDM0 211 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 PTPMT1Q8WUK0 201 aaPredicted RBP9.52□□□□□ -0.89
TPM3-207ENST00000341372 CKAP2Q8WWK9 683 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 DAZLQ92904 295 aaKnown RBP9.52□□□□□ -0.89
TPM3-207ENST00000341372 ZNF354BQ96LW1 612 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 PELOQ9BRX2 385 aaKnown RBP9.52□□□□□ -0.89
TPM3-207ENST00000341372 WDR41Q9HAD4 459 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 PNO1Q9NRX1 252 aaKnown RBP9.52□□□□□ -0.89
TPM3-207ENST00000341372 MYO18BQ8IUG5 2567 aa9.52□□□□□ -0.89
TPM3-207ENST00000341372 UBR5O95071 2799 aaPredicted RBP9.51□□□□□ -0.89
TPM3-207ENST00000341372 A8MUA0 341 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms