RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 H2AFJQ9BTM1 129 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 ULBP1Q9BZM6 244 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 EMC7Q9NPA0 242 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 CTPS2Q9NRF8 586 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 GPR52Q9Y2T5 361 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 PRG3Q9Y2Y8 225 aaPredicted RBP16■□□□□ 0.15
CDK11B-201ENST00000340677 GPR45Q9Y5Y3 372 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 CLCA3PQ9Y6N3 262 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 M0QZK8 103 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 SIX6O95475 246 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 NPR2P20594 1047 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 PITPNBP48739 271 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 PPT1P50897 306 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 PRRX1P54821 245 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 CXCR4P61073 352 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 MAXP61244 160 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 E2F1Q01094 437 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 LRRC8EQ6NSJ5 796 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 ZNF655Q8N720 491 aaPredicted RBP16■□□□□ 0.15
CDK11B-201ENST00000340677 PCDH19Q8TAB3 1148 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 UPRTQ96BW1 309 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 ZNF670Q9BS34 389 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 CERS4Q9HA82 394 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 ABCB8Q9NUT2 735 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 TMEM30AQ9NV96 361 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 FKBPLQ9UIM3 349 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 LHX6Q9UPM6 363 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 GREB1Q4ZG55 1949 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 DHRS12A0PJE2 317 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 MBTPS2O43462 519 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 PROM1O43490 865 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 CA11O75493 328 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 CYB5R3P00387 301 aaPredicted RBP15.99■□□□□ 0.15
CDK11B-201ENST00000340677 HIST1H2AGP0C0S8 130 aaPredicted RBP15.99■□□□□ 0.15
CDK11B-201ENST00000340677 NQO2P16083 231 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 HIST1H2ADP20671 130 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 ELK3P41970 407 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 GAMTQ14353 236 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 GPRC6AQ5T6X5 926 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 FBXW9Q5XUX1 488 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 HIST2H2AA3Q6FI13 130 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 FBXO42Q6P3S6 717 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 EPGNQ6UW88 154 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 DEFB106AQ8N104 65 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 C2orf15Q8WU43 125 aaKnown RBP15.99■□□□□ 0.15
CDK11B-201ENST00000340677 SLC38A4Q969I6 547 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 TMBIM1Q969X1 311 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 OTULINQ96BN8 352 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 HIST1H2AHQ96KK5 128 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 HHIPQ96QV1 700 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 HIST1H2AJQ99878 128 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 KCNS3Q9BQ31 491 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 ENKD1Q9H0I2 346 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 SMURF1Q9HCE7 757 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 PBX3P40426 434 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 RAP1AP62834 184 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 IL5RAQ01344 420 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 PDZK1IP1Q13113 114 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 SH3PXD2AQ5TCZ1 1133 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 AHSA2Q719I0 299 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 DEFB128Q7Z7B8 93 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 GPR149Q86SP6 731 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 STK40Q8N2I9 435 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 OR1S1Q8NH92 325 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 C9orf43Q8TAL5 461 aaPredicted RBP15.99■□□□□ 0.15
CDK11B-201ENST00000340677 SLC35B2Q8TB61 432 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 PYCR2Q96C36 320 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 FAM71F1Q96KD3 344 aaPredicted RBP15.99■□□□□ 0.15
CDK11B-201ENST00000340677 MRGPRX2Q96LB1 330 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 C3orf30Q96M34 536 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 C1QTNF3Q9BXJ4 246 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 NT5DC2Q9H857 520 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 RNF122Q9H9V4 155 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 BRF2Q9HAW0 419 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 LTB4R2Q9NPC1 389 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 SERINC1Q9NRX5 453 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 CACNA2D2Q9NY47 1150 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.99■□□□□ 0.15
CDK11B-201ENST00000340677 CHRNA9Q9UGM1 479 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 ZNF222Q9UK12 451 aa15.99■□□□□ 0.15
CDK11B-201ENST00000340677 DISC1C4P0D8 188 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 FRS3O43559 492 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 ITGA10O75578 1167 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 LGI1O95970 557 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 FGF3P11487 239 aaPredicted RBP15.98■□□□□ 0.15
CDK11B-201ENST00000340677 MYOGP15173 224 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 GRK5P34947 590 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 LIMK2P53671 638 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 CLDN20P56880 219 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 BLOC1S1P78537 153 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 GUCA2BQ16661 112 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 ZNF284Q2VY69 593 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 PCGF3Q3KNV8 242 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 SPDYE7PQ495Y7 208 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 CCDC157Q569K6 752 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 BHLHA9Q7RTU4 235 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 MISPQ8IVT2 679 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 GCNT2Q8N0V5 402 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 DMRTA2Q96SC8 542 aa15.98■□□□□ 0.15
CDK11B-201ENST00000340677 TMEM209Q96SK2 561 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms