RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SCAMP2O15127 329 aaKnown RBP14.11□□□□□ -0.15
VAPA-201ENST00000340541 UGT2B11O75310 529 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 TRIM3O75382 744 aaPredicted RBP14.11□□□□□ -0.15
VAPA-201ENST00000340541 ERN1O75460 977 aaKnown RBP14.11□□□□□ -0.15
VAPA-201ENST00000340541 CELA3AP09093 270 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 RFPL3SP0C7P2 107 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 PRPS2P11908 318 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 COX6B1P14854 86 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 MAGEA5P43359 124 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 CDK9P50750 372 aaKnown RBP14.11□□□□□ -0.15
VAPA-201ENST00000340541 KCNJ2P63252 427 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 PLGLB1Q02325 96 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 EMX2Q04743 252 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 PLCXD2Q0VAA5 305 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 C3AR1Q16581 482 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 SMU1Q2TAY7 513 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 TTMPQ5BVD1 217 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 FNDC7Q5VTL7 733 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 SLC22A16Q86VW1 577 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 RIMKLAQ8IXN7 391 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 FAM109AQ8N4B1 249 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 KRTCAP2Q8N6L1 136 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 OR7A2PQ8NGA2 310 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 DIO2Q92813 273 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 MAGED4Q96JG8 741 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 PHF12Q96QT6 1004 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 ANGPTL4Q9BY76 406 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 DEFB127Q9H1M4 99 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 ZNF703Q9H7S9 590 aaPredicted RBP14.11□□□□□ -0.15
VAPA-201ENST00000340541 ACSS1Q9NUB1 689 aaPredicted RBP14.11□□□□□ -0.15
VAPA-201ENST00000340541 TAS2R9Q9NYW1 312 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 SH3BP4Q9P0V3 963 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 TINAGQ9UJW2 476 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 OTOGQ6ZRI0 2925 aa14.11□□□□□ -0.15
VAPA-201ENST00000340541 PCNX1Q96RV3 2341 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 A0A1B0GTH9 108 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 TSPAN2O60636 221 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 COQ9O75208 318 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 IGHG3P01860 377 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 LAMP1P11279 417 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 G6PDP11413 515 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 HPCAL1P37235 193 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 PTGDSP41222 190 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 CASP3P42574 277 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 C21orf58P58505 322 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 HSPB3Q12988 150 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 TBCELQ5QJ74 424 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 TMEM81Q6P7N7 255 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 NUP54Q7Z3B4 507 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 R3HCC1LQ7Z5L2 792 aaKnown RBP14.1□□□□□ -0.15
VAPA-201ENST00000340541 KIRREL3Q8IZU9 778 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 EID3Q8N140 333 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 OR4N2Q8NGD1 307 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 RAB3IL1Q8TBN0 382 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 HOXB13Q92826 284 aaPredicted RBP14.1□□□□□ -0.15
VAPA-201ENST00000340541 TMBIM1Q969X1 311 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 ZBED6CLQ96FA7 236 aaPredicted RBP14.1□□□□□ -0.15
VAPA-201ENST00000340541 SLC35A4Q96G79 324 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 ATP6V1G3Q96LB4 118 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 RILPQ96NA2 401 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 NODALQ96S42 347 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 SH3GL2Q99962 352 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 DOHHQ9BU89 302 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 NUF2Q9BZD4 464 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 MEAF6Q9HAF1 191 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 ZFP64Q9NPA5 681 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 DDX18Q9NVP1 670 aaKnown RBP14.1□□□□□ -0.15
VAPA-201ENST00000340541 THAP1Q9NVV9 213 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 NKIRAS1Q9NYS0 192 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 NTMQ9P121 344 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 LIPGQ9Y5X9 500 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 PDZD2O15018 2839 aa14.1□□□□□ -0.15
VAPA-201ENST00000340541 FREM3P0C091 2139 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 OR6C70A6NIJ9 312 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 CDC40O60508 579 aaKnown RBP eCLIP14.09□□□□□ -0.15
VAPA-201ENST00000340541 PDE9AO76083 593 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 EFNA1P20827 205 aaPredicted RBP14.09□□□□□ -0.15
VAPA-201ENST00000340541 MAP3K8P41279 467 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 DIO3P55073 304 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 ADORA2A-AS1P86434 159 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 OCRLQ01968 901 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 ZNF155Q12901 538 aaPredicted RBP14.09□□□□□ -0.15
VAPA-201ENST00000340541 MLC1Q15049 377 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 HDXQ7Z353 690 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 WDR53Q7Z5U6 358 aaPredicted RBP14.09□□□□□ -0.15
VAPA-201ENST00000340541 DOLPP1Q86YN1 238 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 SLC44A2Q8IWA5 706 aaPredicted RBP14.09□□□□□ -0.15
VAPA-201ENST00000340541 ZFP28Q8NHY6 868 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 PHF10Q8WUB8 498 aaKnown RBP14.09□□□□□ -0.15
VAPA-201ENST00000340541 RNF138Q8WVD3 245 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 COQ8BQ96D53 544 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 LMF2Q9BU23 707 aaKnown RBP14.09□□□□□ -0.15
VAPA-201ENST00000340541 MANSC1Q9H8J5 431 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 SIRT3Q9NTG7 399 aaPredicted RBP14.09□□□□□ -0.15
VAPA-201ENST00000340541 NOP53Q9NZM5 478 aaKnown RBP14.09□□□□□ -0.15
VAPA-201ENST00000340541 SH3BGRL2Q9UJC5 107 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 BOKQ9UMX3 212 aaPredicted RBP14.09□□□□□ -0.15
VAPA-201ENST00000340541 EIF3LQ9Y262 564 aaKnown RBP14.09□□□□□ -0.15
VAPA-201ENST00000340541 MEMO1Q9Y316 297 aa14.09□□□□□ -0.15
VAPA-201ENST00000340541 HRH3Q9Y5N1 445 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms