RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 AHRP35869 848 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.54□□□□□ -0.24
CPSF7-201ENST00000340437 PPP2R2DQ66LE6 453 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 SLC36A4Q6YBV0 504 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 PLEKHM3Q6ZWE6 761 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 TMEM145Q8NBT3 493 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 DDX31Q9H8H2 851 aaKnown RBP13.54□□□□□ -0.24
CPSF7-201ENST00000340437 TRAPPC4Q9Y296 219 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 DSPPQ9NZW4 1301 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 TBC1D3BA6NDS4 549 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 IGLON5A6NGN9 336 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 SOCS6O14544 535 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 KIAA0355O15063 1070 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 IL1AP01583 271 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 RGS8P57771 180 aaPredicted RBP13.54□□□□□ -0.24
CPSF7-201ENST00000340437 ID2Q02363 134 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 LTB4RQ15722 352 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 FAM27D1Q5T7N8 215 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 GDPGP1Q6ZNW5 385 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 NRMQ8IXM6 262 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 SIX5Q8N196 739 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 DNAJC5GQ8N7S2 189 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 AP3S1Q92572 193 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 POLDIP3Q9BY77 421 aaKnown RBP13.54□□□□□ -0.24
CPSF7-201ENST00000340437 OR51V1Q9H2C8 321 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 RHBGQ9H310 441 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 SLC35C2Q9NQQ7 365 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 PLEKHM1Q9Y4G2 1056 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 MN1Q10571 1320 aaPredicted RBP13.54□□□□□ -0.24
CPSF7-201ENST00000340437 ALPK2Q86TB3 2170 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 FKTNO75072 461 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 REM1O75628 298 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 MAT2AP31153 395 aaKnown RBP13.54□□□□□ -0.24
CPSF7-201ENST00000340437 ELOAQ14241 798 aaKnown RBP13.54□□□□□ -0.24
CPSF7-201ENST00000340437 PLK5Q496M5 336 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 GLYR1Q49A26 553 aaPredicted RBP13.54□□□□□ -0.24
CPSF7-201ENST00000340437 DCUN1D3Q8IWE4 304 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 LRRC56Q8IYG6 542 aaPredicted RBP13.54□□□□□ -0.24
CPSF7-201ENST00000340437 ZNF614Q8N883 585 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 B3GAT2Q9NPZ5 323 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.54□□□□□ -0.24
CPSF7-201ENST00000340437 MAU2Q9Y6X3 613 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 TP53P04637 393 aaPredicted RBP13.53□□□□□ -0.24
CPSF7-201ENST00000340437 PRKCAP17252 672 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 MC3RP41968 323 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 TEKQ02763 1124 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 DUSP2Q05923 314 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 OR4C11Q6IEV9 310 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 IKBIPQ70UQ0 350 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 FAM26EQ8N5C1 309 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 APOBEC4Q8WW27 367 aaKnown RBP13.53□□□□□ -0.24
CPSF7-201ENST00000340437 AMDHD1Q96NU7 426 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 ZNF717Q9BY31 904 aaPredicted RBP13.53□□□□□ -0.24
CPSF7-201ENST00000340437 SEMA4GQ9NTN9 838 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 UCKL1Q9NWZ5 548 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 EXTL2Q9UBQ6 330 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 ZNF222Q9UK12 451 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 ATG4BQ9Y4P1 393 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 IQCMA0A1B0GVH7 501 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 LYRM1O43325 122 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 FCMRO60667 390 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 PRNPP04156 253 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 ADRB3P13945 408 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 CPEP16870 476 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 PTPN2P17706 415 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 CPN2P22792 545 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 TRIM23P36406 574 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 C6orf132Q5T0Z8 1188 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 MZT2BQ6NZ67 158 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 CNKSR3Q6P9H4 555 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 ARL9Q6T311 187 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 RASGRP3Q8IV61 690 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 CPOQ8IVL8 374 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 SLC37A3Q8NCC5 494 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 OR9A2Q8NGT5 310 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 OR2L2Q8NH16 312 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 DEDD2Q8WXF8 326 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 QRFPRQ96P65 431 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 LRRC3BQ96PB8 259 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 ISG20L2Q9H9L3 353 aaKnown RBP13.53□□□□□ -0.24
CPSF7-201ENST00000340437 SAGE1Q9NXZ1 904 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 ENTPD4Q9Y227 616 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 MRPS23Q9Y3D9 190 aaKnown RBP13.53□□□□□ -0.24
CPSF7-201ENST00000340437 AP1M2Q9Y6Q5 423 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 SHISA3A0PJX4 238 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 SNTNA6NMZ2 147 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 A8MVJ9 347 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 PRODHO43272 600 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 LILRB5O75023 590 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 PAK4O96013 591 aaPredicted RBP13.53□□□□□ -0.24
CPSF7-201ENST00000340437 ACADLP28330 430 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 GPLD1P80108 840 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 OCLNQ16625 522 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 ZNF793Q6ZN11 406 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 FAM92BQ6ZTR7 304 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 GDPD1Q8N9F7 314 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 RASSF5Q8WWW0 418 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 OR8D1Q8WZ84 308 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 C6orf106Q9H6K1 298 aaPredicted RBP13.53□□□□□ -0.24
CPSF7-201ENST00000340437 FZD3Q9NPG1 666 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms