RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 CTBP2P56545 445 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 EXOSC7Q15024 291 aaKnown RBP11.26□□□□□ -0.61
USP1-201ENST00000339950 RASSF6Q6ZTQ3 369 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 CCL4L1Q8NHW4 92 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 GRPEL2Q8TAA5 225 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 INSM2Q96T92 566 aaPredicted RBP11.26□□□□□ -0.61
USP1-201ENST00000339950 EPYCQ99645 322 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 DDX31Q9H8H2 851 aaKnown RBP11.26□□□□□ -0.61
USP1-201ENST00000339950 NANSQ9NR45 359 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 C1GALT1Q9NS00 363 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 SPHK1Q9NYA1 384 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 TNFRSF10DQ9UBN6 386 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 SNX7Q9UNH6 387 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 TRBV5-3A0A0A0MS03 114 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 SOCS6O14544 535 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 PIP5K1CO60331 668 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 CSO75390 466 aaKnown RBP11.26□□□□□ -0.61
USP1-201ENST00000339950 DNAJB5O75953 348 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 NFATC1O95644 943 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 PRKACBP22694 351 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 TGM1P22735 817 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 MYL9P24844 172 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 CCDC157Q569K6 752 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 ANKRD53Q8N9V6 530 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 BBS1Q8NFJ9 593 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 TMCO6Q96DC7 493 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 GLIPR2Q9H4G4 154 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 BRD7Q9NPI1 651 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 RABL2BQ9UNT1 228 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 NEUROG3Q9Y4Z2 214 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 PCDHGA2Q9Y5H1 932 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 SCN10AQ9Y5Y9 1956 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 UNC13CQ8NB66 2214 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 DSCR3O14972 297 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 APEHP13798 732 aaKnown RBP11.26□□□□□ -0.61
USP1-201ENST00000339950 ETV5P41161 510 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 MTNR1AP48039 350 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 ETV1P50549 477 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 PRR5P85299 388 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 ZNF155Q12901 538 aaPredicted RBP11.26□□□□□ -0.61
USP1-201ENST00000339950 FADDQ13158 208 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 ELAVL3Q14576 367 aaKnown RBP11.26□□□□□ -0.61
USP1-201ENST00000339950 CDKN3Q16667 212 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 SLC27A4Q6P1M0 643 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 NKAIN4Q8IVV8 208 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 PEX5LQ8IYB4 626 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 OR8J1Q8NGP2 316 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 ITPKCQ96DU7 683 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 DHRS1Q96LJ7 313 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 SAP130Q9H0E3 1048 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 RPS6KB2Q9UBS0 482 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
USP1-201ENST00000339950 CMAHPQ9Y471 501 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 INSL6Q9Y581 213 aa11.26□□□□□ -0.61
USP1-201ENST00000339950 LOC105369274A0A096LPK9 316 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 SLC5A10A0PJK1 596 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 PRAMEF25A6NGN4 478 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 CACNB4O00305 520 aaPredicted RBP11.25□□□□□ -0.61
USP1-201ENST00000339950 EEF1E1O43324 174 aaKnown RBP11.25□□□□□ -0.61
USP1-201ENST00000339950 CA3P07451 260 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 ARAFP10398 606 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 PRKAR1AP10644 381 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 PXNP49023 591 aaPredicted RBP11.25□□□□□ -0.61
USP1-201ENST00000339950 FAM111BQ6SJ93 734 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 RPTNQ6XPR3 784 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 OR4N4Q8N0Y3 316 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 ACOT4Q8N9L9 421 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 SLC16A11Q8NCK7 471 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 UBTD2Q8WUN7 234 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 OR5P2Q8WZ92 322 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 SLC35B4Q969S0 331 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 TM4SF18Q96CE8 201 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 VMP1Q96GC9 406 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 NKX3-1Q99801 234 aaPredicted RBP11.25□□□□□ -0.61
USP1-201ENST00000339950 MND1Q9BWT6 205 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 PLA2G12AQ9BZM1 189 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 ZDHHC5Q9C0B5 715 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 CDCP1Q9H5V8 836 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 EXTL2Q9UBQ6 330 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 ING4Q9UNL4 249 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 TRAV27A0A087WT01 109 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 ANKRD34BA5PLL1 514 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 FAM172BPA6NC97 362 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 KAT7O95251 611 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 DDCP20711 480 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 ELAVL4P26378 380 aaKnown RBP11.25□□□□□ -0.61
USP1-201ENST00000339950 MPIP34949 423 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 SMSP52788 366 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 SMIM11AP58511 58 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 SMAD2Q15796 467 aaKnown RBP11.25□□□□□ -0.61
USP1-201ENST00000339950 MINDY4Q4G0A6 757 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 ARMC6Q6NXE6 501 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 VASH1Q7L8A9 365 aaPredicted RBP11.25□□□□□ -0.61
USP1-201ENST00000339950 ZER1Q7Z7L7 766 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 MINDY2Q8NBR6 621 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 DENND6BQ8NEG7 585 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 OR4D11Q8NGI4 311 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 CCDC59Q9P031 241 aaKnown RBP11.25□□□□□ -0.61
USP1-201ENST00000339950 SERGEFQ9UGK8 458 aa11.25□□□□□ -0.61
USP1-201ENST00000339950 NDRG2Q9UN36 371 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms