RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 PDZD11Q5EBL8 140 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ATXN7L2Q5T6C5 722 aaPredicted RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 MLIPQ5VWP3 458 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ARHGAP11AQ6P4F7 1023 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 TMEM71Q6P5X7 295 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 PODNQ7Z5L7 613 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 MON1AQ86VX9 555 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 CNTN4Q8IWV2 1026 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 NAGSQ8N159 534 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 POMGNT2Q8NAT1 580 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 PXYLP1Q8TE99 480 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ISOC2Q96AB3 205 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 SLC22A18Q96BI1 424 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ZNF75AQ96N20 296 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 SLC6A18Q96N87 628 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 GINS4Q9BRT9 223 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 BARX1Q9HBU1 254 aaPredicted RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 CLN6Q9NWW5 311 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 SAMD4AQ9UPU9 718 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 RNF215Q9Y6U7 377 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 hCG_1809904A0A1W2PP81 198 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 A0A1W2PR64 198 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 A0A1W2PRV1 198 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 GRXCR2A6NFK2 248 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ANKRD61A6NGH8 418 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ZNF705EA8MWA4 302 aaPredicted RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 WASH4PA8MWX3 477 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ARNTLO00327 626 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 RRP8O43159 456 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ATXN1LP0C7T5 689 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ADRB3P13945 408 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 HOXB8P17481 243 aaPredicted RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 AKT1P31749 480 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 HTR5AP47898 357 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ITGA1P56199 1179 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 JAG1P78504 1218 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 SPIBQ01892 262 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 TDGQ13569 410 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 KRT33BQ14525 404 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 KIAA0040Q15053 153 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 SLC36A2Q495M3 483 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ZNF667Q5HYK9 610 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 LIPNQ5VXI9 398 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 GDPD4Q6W3E5 623 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ASPGQ86U10 573 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 NR2C2APQ86WQ0 139 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 MARCH9Q86YJ5 346 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 MISPQ8IVT2 679 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 SAMD12Q8N8I0 201 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 RPLP0P6Q8NHW5 317 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 FAM151AQ8WW52 585 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 EDEM1Q92611 657 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 MAL2Q969L2 176 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 CLCC1Q96S66 551 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 GPR21Q99679 349 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 CPPED1Q9BRF8 314 aaPredicted RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 PINK1Q9BXM7 581 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 C20orf85Q9H1P6 137 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 AGO4Q9HCK5 861 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 UBQLN1Q9UMX0 589 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 PCDHB10Q9UN67 800 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 FAM50BQ9Y247 325 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 PLEKHA6Q9Y2H5 1048 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 NPEPPSL1A6NEC2 478 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 AGAP14A8MT82 685 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 UPK3BL1B0FP48 263 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 FAM220BPB1ANY3 271 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 UPK3BL2E5RIL1 263 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 E9PQ18 207 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 PPIHO43447 177 aaKnown RBP9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 SUV39H1O43463 412 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 LATS1O95835 1130 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 VAMP1P23763 118 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 DDTP30046 118 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 BDKRB2P30411 391 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 GZMMP51124 257 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 PSMA6P60900 246 aaKnown RBP9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 CDK6Q00534 326 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 NFKB2Q00653 900 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 SLC6A3Q01959 620 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 MTMR1Q13613 665 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 TTLL4Q14679 1199 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 ODF4Q2M2E3 257 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 C2orf68Q2NKX9 166 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 TEX30Q5JUR7 227 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 PRSS45Q7RTY3 260 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 TOMM5Q8N4H5 51 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 OR5M1Q8NGP8 315 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 OR5J2Q8NH18 312 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 TCTEX1D2Q8WW35 142 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 ZNF599Q96NL3 588 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 TCEAL7Q9BRU2 100 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 FUZQ9BT04 418 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 MEPEQ9NQ76 525 aaPredicted RBP9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 KCTD3Q9Y597 815 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 A6NLC8 198 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 M0QZ92 97 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 PHYHO14832 338 aa9.11□□□□□ -0.95
PTCHD4-201ENST00000339488 EREGO14944 169 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms