RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 IGFBP1P08833 259 aaPredicted RBP17.68■□□□□ 0.42
PSPC1-201ENST00000338910 PRKAR1AP10644 381 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 ACP5P13686 325 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 HBA1P69905 142 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 ZNF763Q0D2J5 394 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 ILKQ13418 452 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 HTR4Q13639 388 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 ZNF385BQ569K4 471 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 C12orf73Q69YU5 71 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 USP30Q70CQ3 517 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 BCDIN3DQ7Z5W3 292 aaKnown RBP17.68■□□□□ 0.42
PSPC1-201ENST00000338910 OR5K2Q8NHB8 316 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 OR14C36Q8NHC7 312 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 GOT1L1Q8NHS2 421 aaPredicted RBP17.68■□□□□ 0.42
PSPC1-201ENST00000338910 AP3S1Q92572 193 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 SORBS1Q9BX66 1292 aaKnown RBP17.68■□□□□ 0.42
PSPC1-201ENST00000338910 B3GAT2Q9NPZ5 323 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 SMIM30A4D0T7 59 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 OR5K3A6NET4 321 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 EVI2BP34910 448 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 MAPK12P53778 367 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 ABATP80404 500 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 CDK6Q00534 326 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 TMEM196Q5HYL7 178 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 TAGAPQ8N103 731 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 FBXL6Q8N531 539 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 TMEM145Q8NBT3 493 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 DNAJA4Q8WW22 397 aaPredicted RBP17.68■□□□□ 0.42
PSPC1-201ENST00000338910 HYLS1Q96M11 299 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 DCLRE1CQ96SD1 692 aaKnown RBP17.68■□□□□ 0.42
PSPC1-201ENST00000338910 SLC35A5Q9BS91 424 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 GLTPQ9NZD2 209 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 YARS2Q9Y2Z4 477 aaKnown RBP17.68■□□□□ 0.42
PSPC1-201ENST00000338910 TRBV4-1A0A0J9YWV2 114 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 TRBC2A0A5B9 178 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 FFAR1O14842 300 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 SOX14O95416 240 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 PSMB5P28074 263 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 TAS2R50P59544 299 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 PPP3R1P63098 170 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 C2orf80Q0P641 193 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 SGCGQ13326 291 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 P2RY14Q15391 338 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 LCTLQ6UWM7 567 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 SYT14Q8NB59 555 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 RERGLQ9H628 205 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 REEP4Q9H6H4 257 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 LINC00862A6NCI5 91 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 SCAMP1O15126 338 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 ORC5O43913 435 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 SLC35G4P0C7Q5 338 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 NTSR1P30989 418 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 MAT2AP31153 395 aaKnown RBP17.67■□□□□ 0.42
PSPC1-201ENST00000338910 TRIM23P36406 574 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 PCBP3P57721 371 aaKnown RBP17.67■□□□□ 0.42
PSPC1-201ENST00000338910 ZNF776Q68DI1 518 aaPredicted RBP17.67■□□□□ 0.42
PSPC1-201ENST00000338910 CNIH2Q6PI25 160 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 CEACAM20Q6UY09 585 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 ZNF782Q6ZMW2 699 aaPredicted RBP17.67■□□□□ 0.42
PSPC1-201ENST00000338910 GRAMD2AQ8IUY3 354 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 OR8J1Q8NGP2 316 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 OR52P1PQ8NH57 321 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.67■□□□□ 0.42
PSPC1-201ENST00000338910 OMA1Q96E52 524 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 KCNJ15Q99712 375 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 GALNT9Q9HCQ5 603 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 CUEDC1Q9NWM3 386 aaPredicted RBP17.67■□□□□ 0.42
PSPC1-201ENST00000338910 AUP1Q9Y679 476 aa17.67■□□□□ 0.42
PSPC1-201ENST00000338910 KLHL18O94889 574 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 IFNA14P01570 189 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 CHRM5P08912 532 aaPredicted RBP17.66■□□□□ 0.42
PSPC1-201ENST00000338910 CTHP32929 405 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 LRRC74AQ0VAA2 488 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 FAM205BPQ63HN1 556 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 C17orf64Q86WR6 236 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 FAM129CQ86XR2 697 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 OXR1Q8N573 874 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 SMRP1Q8NCR6 262 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 C16orf78Q8WTQ4 265 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 CIDECQ96AQ7 238 aaPredicted RBP17.66■□□□□ 0.42
PSPC1-201ENST00000338910 GFM1Q96RP9 751 aaKnown RBP17.66■□□□□ 0.42
PSPC1-201ENST00000338910 TMEM43Q9BTV4 400 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 DIMT1Q9UNQ2 313 aaKnown RBP17.66■□□□□ 0.42
PSPC1-201ENST00000338910 PLEKHM1Q9Y4G2 1056 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 EGFP01133 1207 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 IFNW1P05000 195 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 RAB25P57735 213 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 OCLNQ16625 522 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 PLK5Q496M5 336 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 KRT78Q8N1N4 520 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 TCEANCQ8N8B7 351 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 OR8H1Q8NGG4 311 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 UBE2E3Q969T4 207 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 FERD3LQ96RJ6 166 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 COMMD3Q9UBI1 195 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 ACSL6Q9UKU0 697 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 ELF5Q9UKW6 265 aaPredicted RBP17.66■□□□□ 0.42
PSPC1-201ENST00000338910 KCNK6Q9Y257 313 aa17.66■□□□□ 0.42
PSPC1-201ENST00000338910 SPIN1Q9Y657 262 aaPredicted RBP17.66■□□□□ 0.42
PSPC1-201ENST00000338910 DNMT3AQ9Y6K1 912 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms