RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CPOXP36551 454 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 CLCN2P51788 898 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 PRMT2P55345 433 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 RPS15AP62244 130 aaKnown RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 ARHGAP1Q07960 439 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 PLCXD3Q63HM9 321 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 ACBD4Q8NC06 268 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 TAAR8Q969N4 342 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 MRPL38Q96DV4 380 aaKnown RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 RSPRY1Q96DX4 576 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 DAZAP1Q96EP5 407 aaKnown RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 ZC3HAV1LQ96H79 300 aaKnown RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 HERPUD2Q9BSE4 406 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 NLE1Q9NVX2 485 aaPredicted RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 AJAP1Q9UKB5 411 aaPredicted RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 GABRQQ9UN88 632 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 ACRV1P26436 265 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 PTGER1P34995 402 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 SGSHP51688 502 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 TUBA3CQ13748 450 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 FGL2Q14314 439 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 LARP4Q71RC2 724 aaKnown RBP eCLIP11.2□□□□□ -0.623e-6■□□□□ 9.6
SHANK2-201ENST00000338508 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 BRI3BPQ8WY22 251 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 CIDECQ96AQ7 238 aaPredicted RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 SLAMF7Q9NQ25 335 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 H3BQ06 376 aaPredicted RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 MT-CO2P00403 227 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 MGST1P10620 155 aaKnown RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 DNASE1P24855 282 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 ART1P52961 327 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 SLC35G1Q2M3R5 365 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 C4orf32Q8N8J7 132 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 MTG2Q9H4K7 406 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 SFXN1Q9H9B4 322 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 WRAP73Q9P2S5 460 aaPredicted RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 NKX1-2Q9UD57 310 aaPredicted RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 PCDHGA1Q9Y5H4 931 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 A6NHS1 94 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 ANKRD30BLA7E2S9 258 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 ZNF705GA8MUZ8 300 aaPredicted RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 UCHL1P09936 223 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 UNGP13051 313 aaPredicted RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 AGTR1P30556 359 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 CDKN2CP42773 168 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 TUBA1BP68363 451 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 TUBA4AP68366 448 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 ABHD18Q0P651 414 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 BORAQ6PGQ7 559 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 TUBA1AQ71U36 451 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.2□□□□□ -0.62
SHANK2-201ENST00000338508 OR5AK2Q8NH90 309 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 NDNFQ8TB73 568 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 OR5P2Q8WZ92 322 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 MOAP1Q96BY2 351 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 LRR1Q96L50 414 aa11.2□□□□□ -0.62
SHANK2-201ENST00000338508 STSP08842 583 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 EMX2Q04743 252 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 EEF1A2Q05639 463 aaKnown RBP11.19□□□□□ -0.62
SHANK2-201ENST00000338508 PLEKHS1Q5SXH7 462 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 TMEM110Q86TL2 294 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 OR52N2Q8NGI0 321 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 ST7LQ8TDW4 575 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 PLCXD1Q9NUJ7 323 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 FAIMQ9NVQ4 179 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 MROH2AA6NES4 1674 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 A0A0U1RQF3 1178 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 DFNA5O60443 496 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 TBX10O75333 385 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 HAPLN1P10915 354 aaPredicted RBP11.19□□□□□ -0.62
SHANK2-201ENST00000338508 BMP4P12644 408 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 ZNF829Q3KNS6 432 aaPredicted RBP11.19□□□□□ -0.62
SHANK2-201ENST00000338508 NIPAL1Q6NVV3 410 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 PDSS2Q86YH6 399 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 PLD6Q8N2A8 252 aaKnown RBP11.19□□□□□ -0.62
SHANK2-201ENST00000338508 HAS2Q92819 552 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 FAM86C1Q9NVL1 165 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 LRRC42Q9Y546 428 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 MYO18AQ92614 2054 aaKnown RBP11.19□□□□□ -0.62
SHANK2-201ENST00000338508 SEMA4FO95754 770 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 C18orf21Q32NC0 220 aaPredicted RBP11.19□□□□□ -0.62
SHANK2-201ENST00000338508 DRICH1Q6PGQ1 229 aaPredicted RBP11.19□□□□□ -0.62
SHANK2-201ENST00000338508 SERPINA12Q8IW75 414 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 ZNF461Q8TAF7 563 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 RSC1A1Q92681 617 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 SNX18Q96RF0 628 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 TINAGL1Q9GZM7 467 aaPredicted RBP11.19□□□□□ -0.62
SHANK2-201ENST00000338508 RPS10P5Q9NQ39 176 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 USP36Q9P275 1121 aaKnown RBP11.19□□□□□ -0.62
SHANK2-201ENST00000338508 KLHL21Q9UJP4 597 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 TRAV18A0A075B6X5 111 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 NPIPA5A0A0B4J1W7 369 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 NPIPA7E9PJI5 369 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 SGK494L7N484 410 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 AIPO00170 330 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 GLSO94925 669 aaPredicted RBP11.19□□□□□ -0.62
SHANK2-201ENST00000338508 NXPH3O95157 252 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 SOD2P04179 222 aa11.19□□□□□ -0.62
SHANK2-201ENST00000338508 ZNF888P0CJ79 500 aaPredicted RBP11.19□□□□□ -0.62
SHANK2-201ENST00000338508 NPIPA8P0DM63 369 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms