RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 BHLHE41Q9C0J9 482 aaPredicted RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 C6orf106Q9H6K1 298 aaPredicted RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 SMURF1Q9HCE7 757 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 SLAMF7Q9NQ25 335 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 NDRG4Q9ULP0 352 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 HSPB11Q9Y547 144 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 LOC100509620A0A075B734 347 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 TRAV27A0A087WT01 109 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 H0YIV9 168 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 RNASET2O00584 256 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 UPK1BO75841 260 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 GABARAPO95166 117 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 CPNE6O95741 557 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 HOXB2P14652 356 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 CMPK1P30085 196 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 GABRA3P34903 492 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 BMPR1AP36894 532 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 HCCSP53701 268 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 KEAP1Q14145 624 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 CST6Q15828 149 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 PRRT3Q5FWE3 981 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 PRPF38BQ5VTL8 546 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 PLAG1Q6DJT9 500 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 FRRS1Q6ZNA5 592 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 Q8N402 240 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 SIMC1Q8NDZ2 872 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 OR52E1Q8NGJ3 308 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 CHPT1Q8WUD6 406 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 ZNF514Q96K75 400 aaPredicted RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 PSORS1C1Q9UIG5 152 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 ATXN7L1Q9ULK2 861 aaPredicted RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 POM121BA6NF01 834 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 ZNF701M0R085 212 aaPredicted RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 AQP9O43315 295 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 CSN2P05814 226 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 HOXB6P17509 224 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 PCGF2P35227 344 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 SOX18P35713 384 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 MTNR1AP48039 350 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 GIPRP48546 466 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 SMSP52788 366 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 SMIM11AP58511 58 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 RAE1P78406 368 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 FADDQ13158 208 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 SQSTM1Q13501 440 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 LARS2Q15031 903 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 ZMYND11Q15326 602 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 FAM27D1Q5T7N8 215 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 TCTN3Q6NUS6 607 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 C11orf88Q6PI97 169 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 Q6ZNB5 142 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 TMPRSS9Q7Z410 1059 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 ANKRD53Q8N9V6 530 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 OR8H1Q8NGG4 311 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 OR8J1Q8NGP2 316 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 CHTF18Q8WVB6 975 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 FCGR1BQ92637 280 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 NKD1Q969G9 470 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 FYTTD1Q96QD9 318 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 NKX3-1Q99801 234 aaPredicted RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 MAPKAP1Q9BPZ7 522 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 CPEB1Q9BZB8 566 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 GLIPR2Q9H4G4 154 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 DUSP21Q9H596 190 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 DDX31Q9H8H2 851 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 NEUROD4Q9HD90 331 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 HRASLS2Q9NWW9 162 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 MRPL39Q9NYK5 338 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 MAU2Q9Y6X3 613 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 NYNRINQ9P2P1 1898 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 ROS1P08922 2347 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 TRBV5-4A0A0C4DH59 114 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 CDC14CA4D256 554 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SDC3O75056 442 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 GPX5O75715 221 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 PAHP00439 452 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 OSMP13725 252 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 DDCP20711 480 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 AP2S1P53680 142 aaPredicted RBP7.75□□□□□ -1.17
HPS4-201ENST00000336873 GABARAPL2P60520 117 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SHC2P98077 582 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SUZ12Q15022 739 aaKnown RBP7.75□□□□□ -1.17
HPS4-201ENST00000336873 METTL2BQ6P1Q9 378 aaKnown RBP7.75□□□□□ -1.17
HPS4-201ENST00000336873 TUBA3EQ6PEY2 450 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SHISA6Q6ZSJ9 500 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 NKAIN4Q8IVV8 208 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SFTPA2Q8IWL1 248 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 OR5T3Q8NGG3 340 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 OR4K13Q8NH42 304 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 OR52P1PQ8NH57 321 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 OR4C6Q8NH72 309 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 OR5P2Q8WZ92 322 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 CDS1Q92903 461 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SLC25A36Q96CQ1 311 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ATP13A2Q9NQ11 1180 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SAGE1Q9NXZ1 904 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 HCN3Q9P1Z3 774 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 MUTYHQ9UIF7 546 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SNX7Q9UNH6 387 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 NCKAP1Q9Y2A7 1128 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms