RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 KITLGP21583 273 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 XPAP23025 273 aaPredicted RBP1.32□□□□□ -2.2
LINC00643-201ENST00000334389 AHCYP23526 432 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 CNTFP26441 200 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 DPP4P27487 766 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 CALRP27797 417 aaKnown RBP1.32□□□□□ -2.2
LINC00643-201ENST00000334389 ECHS1P30084 290 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 STX2P32856 288 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 MCM7P33993 719 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 TXLNAP40222 546 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 RGS6P49758 472 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 CLK3P49761 638 aaKnown RBP1.32□□□□□ -2.2
LINC00643-201ENST00000334389 ATP5J2P56134 94 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 MAP3K7CLP57077 242 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 RASGEF1BQ0VAM2 473 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 MAB21L1Q13394 359 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 ZNF648Q5T619 568 aaPredicted RBP1.32□□□□□ -2.2
LINC00643-201ENST00000334389 FNDC7Q5VTL7 733 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 PRAMEF8Q5VWM4 474 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 PRAMEF7Q5VXH5 474 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 TEX36Q5VZQ5 186 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 CORO6Q6QEF8 472 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 ZNF474Q6S9Z5 364 aaPredicted RBP1.32□□□□□ -2.2
LINC00643-201ENST00000334389 TMCO3Q6UWJ1 677 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 ZNF367Q7RTV3 350 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 TMEM135Q86UB9 458 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 TIGD4Q8IY51 512 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 KIR2DL5AQ8N109 375 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 OR4K5Q8NGD3 323 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 KIR2DL5BQ8NHK3 375 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 CPLX3Q8WVH0 158 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 DPF1Q92782 380 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 TSLPQ969D9 159 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 TMIGD2Q96BF3 282 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 FBXL8Q96CD0 374 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 CXorf40BQ96DE9 158 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 MAP6Q96JE9 813 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 C3orf30Q96M34 536 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 WFIKKN1Q96NZ8 548 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 PGLYRP2Q96PD5 576 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 SULT4A1Q9BR01 284 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 PCGF1Q9BSM1 259 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 TBCDQ9BTW9 1192 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 C1QTNF3Q9BXJ4 246 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 ALOXE3Q9BYJ1 711 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 VN1R1Q9GZP7 353 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 VPS16Q9H269 839 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 TMEM60Q9H2L4 133 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 SMURF2Q9HAU4 748 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 UPF2Q9HAU5 1272 aaKnown RBP1.32□□□□□ -2.2
LINC00643-201ENST00000334389 KCNK13Q9HB14 408 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 TMEM165Q9HC07 324 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 PDRG1Q9NUG6 133 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 PANK4Q9NVE7 773 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 EMC3Q9P0I2 261 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 SLC7A8Q9UHI5 535 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 ENPP5Q9UJA9 477 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 CLEC4AQ9UMR7 237 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 MAPRE3Q9UPY8 281 aa1.32□□□□□ -2.2
LINC00643-201ENST00000334389 A0A087X0M5 115 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 A0A0D9SEW6 157 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 A0A1B0GX30 115 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 NKX2-6A6NCS4 301 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 I3L4J1 428 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 M0R082 166 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 CDC7O00311 574 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 FOXN3O00409 490 aaPredicted RBP1.31□□□□□ -2.2
LINC00643-201ENST00000334389 GPR171O14626 319 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 PHYHO14832 338 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 CDK14O94921 469 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 LY86O95711 162 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 CBX7O95931 251 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 AK1P00568 194 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 C8GP07360 202 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 CD33P20138 364 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 CXCR2P25025 360 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 ACRV1P26436 265 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 HNRNPH3P31942 346 aaKnown RBP1.31□□□□□ -2.2
LINC00643-201ENST00000334389 HTR3AP46098 478 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 IER3P46695 156 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 GNPDA1P46926 289 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 GPR12P47775 334 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 PGFP49763 221 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 HNMTP50135 292 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 PMS1P54277 932 aaKnown RBP1.31□□□□□ -2.2
LINC00643-201ENST00000334389 RAD23AP54725 363 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 NUCB2P80303 420 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 CFHR3Q02985 330 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 KLC1Q07866 573 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 TRAP1Q12931 704 aaKnown RBP1.31□□□□□ -2.2
LINC00643-201ENST00000334389 RUNX2Q13950 521 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 EBI3Q14213 229 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 ZNF267Q14586 743 aaPredicted RBP1.31□□□□□ -2.2
LINC00643-201ENST00000334389 LTB4RQ15722 352 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 CPSF6Q16630 551 aaKnown RBP eCLIP1.31□□□□□ -2.2
LINC00643-201ENST00000334389 DPCR1Q3MIW9 517 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 C19orf54Q5BKX5 351 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 MINOS1Q5TGZ0 78 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 CLEC6AQ6EIG7 209 aa1.31□□□□□ -2.2
LINC00643-201ENST00000334389 KLHL10Q6JEL2 608 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms